Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PSAA
Type: Protein GRN ID: np43347 Name: PSAA
Annotation: PSAA | Photosystem I, PsaA/PsaB protein [TCDB:8.A.30.1]
Gene Locus: ATCG00350
Gene Expression (Affy ATH1 probeset): 245007_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PSAA  --  has similar expression pattern (mutual information value=1.18549) with  --  ATPH
3 PSAA  --  has similar expression pattern (mutual information value=1.24858) with  --  YCF4
4 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB
5 PSAA  --  has similar expression pattern (mutual information value=1.27301) with  --  PSBC
6 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH
7 PSAA  --  has similar expression pattern (mutual information value=1.08423) with  --  NDHH
8 PSAA  --  has similar expression pattern (mutual information value=1.18549) with  --  ATPH  --  has similar expression pattern (mutual information value=1.03386) with  --  PSBD
9 PSAA  --  has similar expression pattern (mutual information value=1.24858) with  --  YCF4  --  has similar expression pattern (mutual information value=2.05652) with  --  YCF10
10 PSAA  --  has similar expression pattern (mutual information value=1.24858) with  --  YCF4  --  has similar expression pattern (mutual information value=1.38053) with  --  PSAI
11 PSAA  --  has similar expression pattern (mutual information value=1.24858) with  --  YCF4  --  has similar expression pattern (mutual information value=1.33544) with  --  RPS7.2
12 PSAA  --  has similar expression pattern (mutual information value=1.24858) with  --  YCF4  --  has similar expression pattern (mutual information value=1.33544) with  --  RPS7; RPS7.1
13 PSAA  --  has similar expression pattern (mutual information value=1.24858) with  --  YCF4  --  has similar expression pattern (mutual information value=1.34663) with  --  NDHD
14 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=0.876989) with  --  ATPB; PB
15 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=0.85341) with  --  ATPE
16 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=1.15623) with  --  PSBG
17 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=1.19392) with  --  YCF9
18 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=1.14013) with  --  CLPP1; PCLPP
19 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=1.23482) with  --  ORF31
20 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=1.23772) with  --  YCF5
21 PSAA  --  has similar expression pattern (mutual information value=1.52575) with  --  PSAB  --  has similar expression pattern (mutual information value=1.2505) with  --  NDHA
22 PSAA  --  has similar expression pattern (mutual information value=1.27301) with  --  PSBC  --  has similar expression pattern (mutual information value=1.12393) with  --  ATPF
23 PSAA  --  has similar expression pattern (mutual information value=1.27301) with  --  PSBC  --  has similar expression pattern (mutual information value=1.02246) with  --  RPL16
24 PSAA  --  has similar expression pattern (mutual information value=1.27301) with  --  PSBC  --  has similar expression pattern (mutual information value=1.0432) with  --  RPS12; RPS12C
25 PSAA  --  has similar expression pattern (mutual information value=1.27301) with  --  PSBC  --  has similar expression pattern (mutual information value=1.0432) with  --  RPS12; RPS12B
26 PSAA  --  has similar expression pattern (mutual information value=1.27301) with  --  PSBC  --  is modified by  --  STN8
27 PSAA  --  has similar expression pattern (mutual information value=1.27301) with  --  PSBC  --  is modified by  --  STN7
28 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH  --  has similar expression pattern (mutual information value=1.18123) with  --  MATK
29 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH  --  has similar expression pattern (mutual information value=1.08097) with  --  ATPA
30 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH  --  has similar expression pattern (mutual information value=1.00182) with  --  RPL23.2
31 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH  --  has similar expression pattern (mutual information value=1.00182) with  --  RPL23; RPL23.1
32 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH  --  has similar expression pattern (mutual information value=1.37766) with  --  PETB
33 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH  --  has similar expression pattern (mutual information value=1.25788) with  --  PSBT; PSBTC
34 PSAA  --  has similar expression pattern (mutual information value=1.23449) with  --  PSBH  --  has similar expression pattern (mutual information value=1.09171) with  --  RPL32
35 PSAA  --  has similar expression pattern (mutual information value=1.08423) with  --  NDHH  --  has similar expression pattern (mutual information value=0.900822) with  --  RPOC1
36 PSAA  --  has similar expression pattern (mutual information value=1.08423) with  --  NDHH  --  has similar expression pattern (mutual information value=1.22718) with  --  ATPI
37 PSAA  --  has similar expression pattern (mutual information value=1.08423) with  --  NDHH  --  has similar expression pattern (mutual information value=1.09763) with  --  RPS8
38 PSAA  --  has similar expression pattern (mutual information value=1.08423) with  --  NDHH  --  has similar expression pattern (mutual information value=1.28426) with  --  PSBB
39 PSAA  --  has similar expression pattern (mutual information value=1.08423) with  --  NDHH  --  transport  --  Folate
40 PSAA  --  has similar expression pattern (mutual information value=1.08423) with  --  NDHH  --  transport  --  FAD
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact