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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G62950
Type: Protein GRN ID: np38577 Name:
Annotation: RNA polymerase II, Rpb4, core protein
Gene Locus: AT5G62950
Gene Expression (Affy ATH1 probeset): 247398_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G62950  --  interacts with  --  AT1G06790
3 AT5G62950  --  has similar expression pattern (mutual information value=0.817505) with  --  ATCOAE
4 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220
5 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A
6 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36B; BRCC36B
7 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140
8 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750
9 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350
10 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1
11 AT5G62950  --  interacts with  --  AT1G06790  --  interacts with  --  AT1G11430
12 AT5G62950  --  interacts with  --  AT1G06790  --  interacts with  --  DAL; DAL1
13 AT5G62950  --  interacts with  --  AT1G06790  --  interacts with  --  AT4G20020
14 AT5G62950  --  has similar expression pattern (mutual information value=0.817505) with  --  ATCOAE  --  has similar expression pattern (mutual information value=0.86506) with  --  AT2G27480
15 AT5G62950  --  has similar expression pattern (mutual information value=0.817505) with  --  ATCOAE  --  has similar expression pattern (mutual information value=0.872744) with  --  AT1G78420
16 AT5G62950  --  has similar expression pattern (mutual information value=0.817505) with  --  ATCOAE  --  has similar expression pattern (mutual information value=0.868625) with  --  XTH7
17 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=1.0818) with  --  AT2G35330
18 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.974796) with  --  ATCSN2; COP12; CSN2; FUS12
19 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.981278) with  --  ATDSS1(I); DSS1(I)
20 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.946403) with  --  AT2G01100
21 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.877674) with  --  AT1G02330
22 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.971484) with  --  AT3G05510
23 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.805971) with  --  PEX22
24 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.951419) with  --  AT4G18260
25 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.896188) with  --  AT3G48120
26 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.840347) with  --  AT5G53570
27 AT5G62950  --  has similar expression pattern (mutual information value=0.827263) with  --  AT1G65220  --  has similar expression pattern (mutual information value=0.874439) with  --  HOS15
28 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  interacts with  --  AT4G37130
29 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=1.09662) with  --  AT2G02570
30 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.918696) with  --  AT2G31130
31 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.802219) with  --  AT2G10950
32 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.978693) with  --  SMP1
33 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.883867) with  --  AT2G24830
34 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.890753) with  --  AT1G01930
35 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.8653) with  --  AT3G08880
36 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.83021) with  --  AT3G21810
37 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.8214) with  --  AT4G02210
38 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.937502) with  --  AT4G12760
39 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.870847) with  --  AT4G13160
40 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.823579) with  --  AT3G48880
41 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.86342) with  --  AT3G53390
42 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.817843) with  --  AT3G55600
43 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.800738) with  --  ACSF; CHL27; CRD1
44 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.855569) with  --  RPL27
45 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.840962) with  --  AT5G63640
46 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.904462) with  --  AT5G65240
47 AT5G62950  --  has similar expression pattern (mutual information value=0.84814) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.91984) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
48 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.863841) with  --  AT2G44200
49 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.813304) with  --  WRKY4
50 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.843556) with  --  AT1G63490
51 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.860924) with  --  AT1G70590
52 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.891642) with  --  AT1G13880
53 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.02549) with  --  OBE1
54 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.899608) with  --  ATCHIP; CHIP
55 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.99274) with  --  CHR11
56 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.92917) with  --  AT3G04160
57 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.802269) with  --  AT1G77250
58 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.816496) with  --  AT3G14075
59 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.813811) with  --  AT3G13410
60 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.27112) with  --  NF-YC11
61 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.14426) with  --  ATMBD8; MBD8
62 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04481) with  --  AT4G08580
63 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04481) with  --  AT5G17900
64 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.973558) with  --  AT4G32450
65 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.896986) with  --  AME3
66 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.801879) with  --  AT5G08230
67 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.801879) with  --  ath-miR834
68 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.882395) with  --  AT5G43490
69 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.882395) with  --  AT5G48610
70 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.857695) with  --  AT5G65290
71 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.958829) with  --  AT1G25988
72 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.958829) with  --  AT1G25682
73 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.817118) with  --  AT5G04240
74 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.919068) with  --  FAR1
75 AT5G62950  --  has similar expression pattern (mutual information value=0.846261) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.952254) with  --  ATRCY1; RCY1
76 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=0.837733) with  --  mtLPD1
77 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=1.05157) with  --  AT1G56190
78 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=1.18226) with  --  ATRAB8D; ATRABE1B; RABE1b
79 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=0.836742) with  --  AT3G62920
80 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=0.97544) with  --  ATGSL1; GLN2; GS2
81 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=0.838851) with  --  BOU
82 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=0.963337) with  --  ADG1; APS1
83 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=0.846849) with  --  APK4
84 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has similar expression pattern (mutual information value=0.866901) with  --  ATOPT3; OPT3; OPT3
85 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has product (in catalytic reaction)  --  D-Xylulose 5-phosphate
86 AT5G62950  --  has similar expression pattern (mutual information value=0.87295) with  --  AT3G60750  --  has product (in catalytic reaction)  --  D-Ribose 5-phosphate
87 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.976506) with  --  AT2G30530
88 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.895249) with  --  CRF7
89 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.803612) with  --  AT1G65000
90 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.884882) with  --  PYM
91 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.826117) with  --  AtPFA-DSP3; PFA-DSP3
92 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.824211) with  --  AT1G16810
93 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.932816) with  --  ARI1; ATARI1
94 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.932884) with  --  AT5G08535
95 AT5G62950  --  has similar expression pattern (mutual information value=0.842609) with  --  AT5G01350  --  has similar expression pattern (mutual information value=0.883606) with  --  SBP1
96 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT5G03345
97 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT1G14990
98 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT5G35460
99 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  RHA1A
100 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT1G14020
101 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT1G11450
102 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  ATMAPR3; ATMP2; MAPR3; MSBP2
103 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT1G63110
104 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  ABCI12
105 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AGP27; ATAGP27
106 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  ELIP2
107 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  ATFACE-2; ATFACE2; FACE2; RCE1
108 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  ARGOS
109 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT1G75220
110 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  AT4G12000
111 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  interacts with  --  CYP81D8
112 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  has similar expression pattern (mutual information value=0.941545) with  --  AT2G22230
113 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  has similar expression pattern (mutual information value=0.814561) with  --  FAB2; SSI2
114 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  has similar expression pattern (mutual information value=0.872374) with  --  LTA2; PLE2
115 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  has similar expression pattern (mutual information value=0.87228) with  --  ORF02; PHT2;1
116 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  has similar expression pattern (mutual information value=1.09307) with  --  NAGK
117 AT5G62950  --  has similar expression pattern (mutual information value=0.812136) with  --  DiT1  --  has similar expression pattern (mutual information value=1.1768) with  --  ASN2
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