Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G77250
Type: Protein GRN ID: np11915 Name:
Annotation: RING/FYVE/PHD-type zinc finger family protein
Gene Locus: AT1G77250
Transcription factor /
transcriptional regulator:		 chromatin regulator family PHD
Gene Expression (Affy ATH1 probeset): 257420_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140
3 AT1G77250  --  has similar expression pattern (mutual information value=0.890796) with  --  NPX1
4 AT1G77250  --  has similar expression pattern (mutual information value=0.830869) with  --  AT5G65290
5 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.863841) with  --  AT2G44200
6 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.01763) with  --  AT2G02570
7 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.853231) with  --  AT2G31130
8 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04656) with  --  SMP1
9 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.891076) with  --  AT2G24830
10 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.885627) with  --  AT1G65220
11 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.813304) with  --  WRKY4
12 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.914393) with  --  AT2G01100
13 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.05212) with  --  AtBRCC36A; BRCC36A
14 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.05212) with  --  AtBRCC36B; BRCC36B
15 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.843556) with  --  AT1G63490
16 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.860924) with  --  AT1G70590
17 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.891642) with  --  AT1G13880
18 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.02549) with  --  OBE1
19 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.899608) with  --  ATCHIP; CHIP
20 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.99274) with  --  CHR11
21 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.92917) with  --  AT3G04160
22 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.816496) with  --  AT3G14075
23 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.813811) with  --  AT3G13410
24 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.27112) with  --  NF-YC11
25 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.14426) with  --  ATMBD8; MBD8
26 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.881774) with  --  AT4G02210
27 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04481) with  --  AT4G08580
28 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04481) with  --  AT5G17900
29 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.820536) with  --  AT4G13160
30 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.09832) with  --  AT4G18260
31 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.973558) with  --  AT4G32450
32 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.896986) with  --  AME3
33 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.840275) with  --  AT3G55600
34 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.801879) with  --  AT5G08230
35 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.801879) with  --  ath-miR834
36 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.841822) with  --  RPL27
37 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.882395) with  --  AT5G43490
38 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.882395) with  --  AT5G48610
39 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.846261) with  --  AT5G62950
40 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.994645) with  --  HOS15
41 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.92489) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
42 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.958829) with  --  AT1G25988
43 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.958829) with  --  AT1G25682
44 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.817118) with  --  AT5G04240
45 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.919068) with  --  FAR1
46 AT1G77250  --  has similar expression pattern (mutual information value=0.802269) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.952254) with  --  ATRCY1; RCY1
47 AT1G77250  --  has similar expression pattern (mutual information value=0.890796) with  --  NPX1  --  interacts with  --  ANAC091; TIP
48 AT1G77250  --  has similar expression pattern (mutual information value=0.890796) with  --  NPX1  --  has similar expression pattern (mutual information value=0.811935) with  --  AT1G74250
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact