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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G08880
Type: Protein GRN ID: np27243 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits to 175 proteins in 60 species: Archae - 4; Bacteria - 33; Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). [TCDB:3.A.16.1] [TCDB:9.A.5.1]
Gene Locus: AT3G08880
Gene Expression (Affy ATH1 probeset): 258981_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A
3 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36B; BRCC36B
4 AT3G08880  --  has similar expression pattern (mutual information value=0.819354) with  --  AT4G18260
5 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37
6 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  interacts with  --  AT4G37130
7 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=1.09662) with  --  AT2G02570
8 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.918696) with  --  AT2G31130
9 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.802219) with  --  AT2G10950
10 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.978693) with  --  SMP1
11 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.883867) with  --  AT2G24830
12 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.957824) with  --  AT1G65220
13 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.890753) with  --  AT1G01930
14 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.88433) with  --  AT3G05510
15 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.83021) with  --  AT3G21810
16 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=1.05212) with  --  AT3G12140
17 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.8214) with  --  AT4G02210
18 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.937502) with  --  AT4G12760
19 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.870847) with  --  AT4G13160
20 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.916054) with  --  AT3G48120
21 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.823579) with  --  AT3G48880
22 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.86342) with  --  AT3G53390
23 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.817843) with  --  AT3G55600
24 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.800738) with  --  ACSF; CHL27; CRD1
25 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.855569) with  --  RPL27
26 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.84814) with  --  AT5G62950
27 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.840962) with  --  AT5G63640
28 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.904462) with  --  AT5G65240
29 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.964061) with  --  HOS15
30 AT3G08880  --  has similar expression pattern (mutual information value=0.8653) with  --  AtBRCC36A; BRCC36A  --  has similar expression pattern (mutual information value=0.91984) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
31 AT3G08880  --  has similar expression pattern (mutual information value=0.819354) with  --  AT4G18260  --  has similar expression pattern (mutual information value=0.847747) with  --  AT2G27285
32 AT3G08880  --  has similar expression pattern (mutual information value=0.819354) with  --  AT4G18260  --  has similar expression pattern (mutual information value=0.975092) with  --  AT1G02330
33 AT3G08880  --  has similar expression pattern (mutual information value=0.819354) with  --  AT4G18260  --  has similar expression pattern (mutual information value=0.851525) with  --  AtMYB4R1; MYB4R1
34 AT3G08880  --  has similar expression pattern (mutual information value=0.819354) with  --  AT4G18260  --  has similar expression pattern (mutual information value=0.902146) with  --  CPL4
35 AT3G08880  --  has similar expression pattern (mutual information value=0.819354) with  --  AT4G18260  --  has similar expression pattern (mutual information value=0.998352) with  --  AT1G25988
36 AT3G08880  --  has similar expression pattern (mutual information value=0.819354) with  --  AT4G18260  --  has similar expression pattern (mutual information value=0.998352) with  --  AT1G25682
37 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  KIWI
38 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  AT5G65683
39 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  AT1G54770
40 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  AT1G19830
41 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  BRX
42 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  AT3G08780
43 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  ATBPM3; BPM3
44 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  AT2G30120
45 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  interacts with  --  ATFKBP12; FKBP12
46 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.921488) with  --  AT2G16860
47 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.898424) with  --  ATIPT2
48 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.881332) with  --  MBD10
49 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.955617) with  --  AT1G15200
50 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.895295) with  --  AT1G32630
51 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.882162) with  --  NF-YC10
52 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.864016) with  --  AT3G09360
53 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.878592) with  --  AT3G19650
54 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.895898) with  --  AT4G39160
55 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.817238) with  --  AT5G06780
56 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.800932) with  --  AT5G11760
57 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.826071) with  --  AT5G50020
58 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.826366) with  --  NRPB6A; NRPD6A; NRPE6A
59 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.904032) with  --  AT5G53800
60 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.855311) with  --  ELF9
61 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.925366) with  --  AT1G31870
62 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.900879) with  --  FAR1
63 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.955064) with  --  SMU2
64 AT3G08880  --  has similar expression pattern (mutual information value=0.814375) with  --  ATFIP37; FIP37  --  is the target gene of  --  ath-miR4221
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