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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G13880
Type: Protein GRN ID: np13484 Name:
Annotation: ELM2 domain-containing protein
Gene Locus: AT1G13880
Gene Expression (Affy ATH1 probeset): 259423_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140
3 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11
4 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B
5 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.863841) with  --  AT2G44200
6 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.01763) with  --  AT2G02570
7 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.853231) with  --  AT2G31130
8 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04656) with  --  SMP1
9 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.891076) with  --  AT2G24830
10 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.885627) with  --  AT1G65220
11 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.813304) with  --  WRKY4
12 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.914393) with  --  AT2G01100
13 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.05212) with  --  AtBRCC36A; BRCC36A
14 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.05212) with  --  AtBRCC36B; BRCC36B
15 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.843556) with  --  AT1G63490
16 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.860924) with  --  AT1G70590
17 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.02549) with  --  OBE1
18 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.899608) with  --  ATCHIP; CHIP
19 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.99274) with  --  CHR11
20 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.92917) with  --  AT3G04160
21 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.802269) with  --  AT1G77250
22 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.816496) with  --  AT3G14075
23 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.813811) with  --  AT3G13410
24 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.14426) with  --  ATMBD8; MBD8
25 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.881774) with  --  AT4G02210
26 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04481) with  --  AT4G08580
27 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.04481) with  --  AT5G17900
28 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.820536) with  --  AT4G13160
29 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=1.09832) with  --  AT4G18260
30 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.973558) with  --  AT4G32450
31 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.896986) with  --  AME3
32 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.840275) with  --  AT3G55600
33 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.801879) with  --  AT5G08230
34 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.801879) with  --  ath-miR834
35 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.841822) with  --  RPL27
36 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.882395) with  --  AT5G43490
37 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.882395) with  --  AT5G48610
38 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.846261) with  --  AT5G62950
39 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.857695) with  --  AT5G65290
40 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.994645) with  --  HOS15
41 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.92489) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
42 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.958829) with  --  AT1G25988
43 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.958829) with  --  AT1G25682
44 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.817118) with  --  AT5G04240
45 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.919068) with  --  FAR1
46 AT1G13880  --  has similar expression pattern (mutual information value=0.891642) with  --  AT3G12140  --  has similar expression pattern (mutual information value=0.952254) with  --  ATRCY1; RCY1
47 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  interacts with  --  AtLEC1; EMB 212; EMB212; LEC1; NF-YB9
48 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  interacts with  --  NF-YB2
49 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  interacts with  --  NF-YB3
50 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  interacts with  --  NF-YB7
51 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.04283) with  --  AT2G30530
52 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.868529) with  --  AT2G31670
53 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.970427) with  --  MBD10
54 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.827401) with  --  AT1G21610
55 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.813346) with  --  BZIP28
56 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.968398) with  --  AT3G21810
57 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.825664) with  --  AT1G17790
58 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.993189) with  --  ARI1; ATARI1
59 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.969989) with  --  SIS3
60 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.877818) with  --  AT3G53930
61 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.968632) with  --  AT3G61800
62 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.821822) with  --  AT3G62080
63 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.0644) with  --  AT5G01350
64 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.943487) with  --  anac078; NAC2
65 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=1.03) with  --  AT5G08535
66 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.820348) with  --  ATSRL1
67 AT1G13880  --  has similar expression pattern (mutual information value=0.854792) with  --  NF-YC11  --  has similar expression pattern (mutual information value=0.829682) with  --  AT5G63640
68 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.808433) with  --  BRIZ1
69 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.813189) with  --  VPS2.1
70 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.840422) with  --  EIF4B1
71 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.904971) with  --  AT3G46930
72 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.837935) with  --  AT3G48120
73 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.907072) with  --  AT5G13970
74 AT1G13880  --  has similar expression pattern (mutual information value=0.853526) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B  --  has similar expression pattern (mutual information value=0.820226) with  --  AT5G14710
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