Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G10925
Type: Protein GRN ID: np35014 Name:
Annotation: Nuclear transport factor 2 (NTF2) family protein
Gene Locus: AT4G10925
Gene Expression (Affy ATH1 probeset): 254953_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G10925  --  interacts with  --  SCM; SRF9; SUB
3 AT4G10925  --  has similar expression pattern (mutual information value=0.830996) with  --  AT1G15920
4 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6
5 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110
6 AT4G10925  --  has similar expression pattern (mutual information value=0.839912) with  --  AT5G05710
7 AT4G10925  --  has similar expression pattern (mutual information value=0.918599) with  --  AT5G16470
8 AT4G10925  --  has similar expression pattern (mutual information value=0.860886) with  --  AT5G51170
9 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT3G28040
10 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G24100
11 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  ATPRK2A; PRK2A
12 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G10290
13 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT2G27060
14 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  ATMLO2; MLO2; PMR2
15 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G63930
16 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  BIR1
17 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT3G02880
18 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G16220
19 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AN
20 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT2G29180
21 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G14030
22 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AHA8; HA8
23 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G59940
24 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT2G26730
25 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  IMK2
26 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT4G23740
27 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G62710
28 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  FRK1
29 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  QKY
30 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  transport  --  Glycerol
31 AT4G10925  --  interacts with  --  SCM; SRF9; SUB  --  is the target gene of  --  ath-miR5020a
32 AT4G10925  --  has similar expression pattern (mutual information value=0.830996) with  --  AT1G15920  --  has similar expression pattern (mutual information value=0.800753) with  --  ERCC1; UVR7
33 AT4G10925  --  has similar expression pattern (mutual information value=0.830996) with  --  AT1G15920  --  has similar expression pattern (mutual information value=0.858046) with  --  SKIP5; SKP5
34 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6  --  has similar expression pattern (mutual information value=0.833727) with  --  AT2G45620
35 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6  --  has similar expression pattern (mutual information value=0.807697) with  --  AT1G36070
36 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6  --  has similar expression pattern (mutual information value=0.882489) with  --  AT1G45150
37 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6  --  has similar expression pattern (mutual information value=0.982696) with  --  ADA2A; ATADA2A; HAC10; HXA02; HXA2
38 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6  --  has similar expression pattern (mutual information value=0.804437) with  --  AT4G32910
39 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6  --  has similar expression pattern (mutual information value=0.875862) with  --  ABCD1; ACN2; AtABCD1; CTS; PED3; PXA1
40 AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6  --  has similar expression pattern (mutual information value=0.816265) with  --  ATSYP23; SYP23
41 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.873712) with  --  AT1G27580
42 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.873712) with  --  AT1G27540
43 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.952477) with  --  ATAN11; LWD1
44 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.87557) with  --  AT3G01740
45 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.848565) with  --  AT3G04560
46 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.827671) with  --  PDE320; TGD4
47 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.910826) with  --  AT3G24200
48 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.890959) with  --  AT1G66660
49 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.887325) with  --  AT5G01390
50 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.915327) with  --  AT5G04520
51 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.934604) with  --  AT5G12190
52 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.807202) with  --  AT5G14530
53 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.802407) with  --  UCH1
54 AT4G10925  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.871938) with  --  DIM1A
55 AT4G10925  --  has similar expression pattern (mutual information value=0.839912) with  --  AT5G05710  --  has similar expression pattern (mutual information value=0.826344) with  --  ATRHM1; RHM1; ROL1
56 AT4G10925  --  has similar expression pattern (mutual information value=0.839912) with  --  AT5G05710  --  has similar expression pattern (mutual information value=0.890035) with  --  SCPL7
57 AT4G10925  --  has similar expression pattern (mutual information value=0.839912) with  --  AT5G05710  --  has similar expression pattern (mutual information value=0.865813) with  --  AT5G22875
58 AT4G10925  --  has similar expression pattern (mutual information value=0.918599) with  --  AT5G16470  --  has similar expression pattern (mutual information value=0.937563) with  --  ARI15; ATARI15
59 AT4G10925  --  has similar expression pattern (mutual information value=0.860886) with  --  AT5G51170  --  has similar expression pattern (mutual information value=0.8337) with  --  ATSERAT3;1; SAT-106
60 AT4G10925  --  has similar expression pattern (mutual information value=0.860886) with  --  AT5G51170  --  has similar expression pattern (mutual information value=0.805114) with  --  AT1G56610
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab