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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G59940
Type: Protein GRN ID: np40311 Name:
Annotation: Cysteine/Histidine-rich C1 domain family protein
Gene Locus: AT5G59940
Transcription factor /
transcriptional regulator:		 chromatin regulator family PHD
Gene Expression (Affy ATH1 probeset): 247675_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G59940  --  interacts with  --  SCM; SRF9; SUB
3 AT5G59940  --  interacts with  --  AT1G63360
4 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT3G28040
5 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G24100
6 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  ATPRK2A; PRK2A
7 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G10290
8 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT2G27060
9 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  ATMLO2; MLO2; PMR2
10 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G63930
11 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  BIR1
12 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT3G02880
13 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G16220
14 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AN
15 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT2G29180
16 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G14030
17 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AHA8; HA8
18 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT2G26730
19 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  IMK2
20 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT4G10925
21 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT4G23740
22 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  AT5G62710
23 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  FRK1
24 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  interacts with  --  QKY
25 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  transport  --  Glycerol
26 AT5G59940  --  interacts with  --  SCM; SRF9; SUB  --  is the target gene of  --  ath-miR5020a
27 AT5G59940  --  interacts with  --  AT1G63360  --  interacts with  --  AT5G66830
28 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.860576) with  --  AT1G22630
29 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.892527) with  --  GAPB
30 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.816064) with  --  MFP1
31 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.89291) with  --  AT3G19480
32 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.804136) with  --  AT3G47070
33 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.849977) with  --  AT3G50270
34 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.851493) with  --  CSP41A
35 AT5G59940  --  interacts with  --  AT1G63360  --  has similar expression pattern (mutual information value=0.826863) with  --  CaS
36 AT5G59940  --  interacts with  --  AT1G63360  --  is the target gene of  --  ath-miR472
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