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Location:  Home > Details for node AT3G04560
Type: Protein GRN ID: np25652 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink).
Gene Locus: AT3G04560
Gene Expression (Affy ATH1 probeset): 258801_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110
3 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910
4 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.873712) with  --  AT1G27580
5 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.873712) with  --  AT1G27540
6 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.861819) with  --  AT1G15920
7 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.952477) with  --  ATAN11; LWD1
8 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.87557) with  --  AT3G01740
9 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.827671) with  --  PDE320; TGD4
10 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.910826) with  --  AT3G24200
11 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.890959) with  --  AT1G66660
12 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=1.00422) with  --  AT4G10925
13 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=1.21159) with  --  AT4G32910
14 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.887325) with  --  AT5G01390
15 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.915327) with  --  AT5G04520
16 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.897907) with  --  AT5G05710
17 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.934604) with  --  AT5G12190
18 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.807202) with  --  AT5G14530
19 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.802407) with  --  UCH1
20 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.972582) with  --  AT5G16470
21 AT3G04560  --  has similar expression pattern (mutual information value=0.848565) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.871938) with  --  DIM1A
22 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.821673) with  --  AT1G61620
23 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.869246) with  --  ATSERAT3;1; SAT-106
24 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=1.13145) with  --  emb1220
25 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=1.13145) with  --  AT3G60610
26 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.941641) with  --  AT3G10030
27 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.931725) with  --  OBF5
28 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.870452) with  --  AT5G49880
29 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.90917) with  --  FIP2
30 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.824176) with  --  AT3G56720
31 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.836645) with  --  AT5G10710
32 AT3G04560  --  has similar expression pattern (mutual information value=0.904788) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.907376) with  --  AT4G16440
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