Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G05710
Type: Protein GRN ID: np42057 Name:
Annotation: Pleckstrin homology (PH) domain superfamily protein
Gene Locus: AT5G05710
Gene Expression (Affy ATH1 probeset): 250748_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G05710  --  has similar expression pattern (mutual information value=0.826344) with  --  ATRHM1; RHM1; ROL1
3 AT5G05710  --  has similar expression pattern (mutual information value=0.890035) with  --  SCPL7
4 AT5G05710  --  has similar expression pattern (mutual information value=0.839912) with  --  AT4G10925
5 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110
6 AT5G05710  --  has similar expression pattern (mutual information value=0.85951) with  --  AT5G16470
7 AT5G05710  --  has similar expression pattern (mutual information value=0.865813) with  --  AT5G22875
8 AT5G05710  --  has similar expression pattern (mutual information value=0.851305) with  --  AT5G51170
9 AT5G05710  --  has similar expression pattern (mutual information value=0.826344) with  --  ATRHM1; RHM1; ROL1  --  has product (in catalytic reaction)  --  UDP-4-dehydro-6-deoxy-D-glucose
10 AT5G05710  --  has similar expression pattern (mutual information value=0.826344) with  --  ATRHM1; RHM1; ROL1  --  interacts with  --  AT4G37130
11 AT5G05710  --  has similar expression pattern (mutual information value=0.826344) with  --  ATRHM1; RHM1; ROL1  --  interacts with  --  NRS/ER; UER1
12 AT5G05710  --  has similar expression pattern (mutual information value=0.839912) with  --  AT4G10925  --  interacts with  --  SCM; SRF9; SUB
13 AT5G05710  --  has similar expression pattern (mutual information value=0.839912) with  --  AT4G10925  --  has similar expression pattern (mutual information value=0.830996) with  --  AT1G15920
14 AT5G05710  --  has similar expression pattern (mutual information value=0.839912) with  --  AT4G10925  --  has similar expression pattern (mutual information value=0.867568) with  --  TRFL6
15 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.873712) with  --  AT1G27580
16 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.873712) with  --  AT1G27540
17 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.952477) with  --  ATAN11; LWD1
18 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.87557) with  --  AT3G01740
19 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.848565) with  --  AT3G04560
20 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.827671) with  --  PDE320; TGD4
21 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.910826) with  --  AT3G24200
22 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.890959) with  --  AT1G66660
23 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=1.21159) with  --  AT4G32910
24 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.887325) with  --  AT5G01390
25 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.915327) with  --  AT5G04520
26 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.934604) with  --  AT5G12190
27 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.807202) with  --  AT5G14530
28 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.802407) with  --  UCH1
29 AT5G05710  --  has similar expression pattern (mutual information value=0.897907) with  --  AT4G21110  --  has similar expression pattern (mutual information value=0.871938) with  --  DIM1A
30 AT5G05710  --  has similar expression pattern (mutual information value=0.85951) with  --  AT5G16470  --  has similar expression pattern (mutual information value=0.937563) with  --  ARI15; ATARI15
31 AT5G05710  --  has similar expression pattern (mutual information value=0.865813) with  --  AT5G22875  --  has similar expression pattern (mutual information value=0.860604) with  --  AT1G56610
32 AT5G05710  --  has similar expression pattern (mutual information value=0.851305) with  --  AT5G51170  --  has similar expression pattern (mutual information value=0.8337) with  --  ATSERAT3;1; SAT-106
33 AT5G05710  --  has similar expression pattern (mutual information value=0.851305) with  --  AT5G51170  --  has similar expression pattern (mutual information value=0.852644) with  --  AT1G45150
34 AT5G05710  --  has similar expression pattern (mutual information value=0.851305) with  --  AT5G51170  --  has similar expression pattern (mutual information value=0.953892) with  --  ERCC1; UVR7
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact