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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PDF2
Type: Protein GRN ID: np34012 Name: PDF2
Annotation: PDF2 | protodermal factor 2
Gene Locus: AT4G04890
Transcription factor /
transcriptional regulator:		 transcription factor & lipid binding family HD-SAD
Gene Expression (Affy ATH1 probeset): 255277_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PDF2  --  interacts with  --  AT5G38420
3 PDF2  --  interacts with  --  ATML1
4 PDF2  --  interacts with  --  RGA1
5 PDF2  --  interacts with  --  RGL2
6 PDF2  --  interacts with  --  APL; WDY
7 PDF2  --  interacts with  --  AT3G07270
8 PDF2  --  regulates the expression of   --  PDF1
9 PDF2  --  has similar expression pattern (mutual information value=0.864768) with  --  LTPG1
10 PDF2  --  interacts with  --  AT5G38420  --  has product (in catalytic reaction)  --  D-Ribulose 1,5-bisphosphate
11 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT1G09660
12 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  BOP2
13 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  ARF16
14 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT3G14120
15 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  ACD31.2; ACD32.1
16 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT3G27960
17 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  LSU2
18 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  JAI3
19 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  BP; BP1; KNAT1
20 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT1G01440
21 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT4G17680
22 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G32440
23 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G28050
24 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  SEC
25 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  LSU1
26 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AtTCP11; TCP11
27 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  BLH1; EDA29
28 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  ATHDG11; EDT1; HDG11
29 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AtTCP15; TCP15
30 PDF2  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G11980
31 PDF2  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02909) with  --  DRT112; PETE2
32 PDF2  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02964) with  --  AT5G28450
33 PDF2  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02964) with  --  LHCA2
34 PDF2  --  interacts with  --  ATML1  --  has similar expression pattern (mutual information value=1.12285) with  --  FDH; KCS10
35 PDF2  --  interacts with  --  RGA1  --  regulates the expression of   --  LGO; SMR1
36 PDF2  --  interacts with  --  RGA1  --  regulates the expression of   --  ATMYC2
37 PDF2  --  interacts with  --  RGA1  --  is regulated by  --  pil5
38 PDF2  --  interacts with  --  RGA1  --  interacts with  --  NF-YB2
39 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATHAP2B; HAP2B; NF-YA2; UNE8
40 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATHAP2A; EMB2220; HAP2A; NF-YA1
41 PDF2  --  interacts with  --  RGA1  --  interacts with  --  HAP5C; NF-YC9
42 PDF2  --  interacts with  --  RGA1  --  interacts with  --  NF-YC3
43 PDF2  --  interacts with  --  RGA1  --  interacts with  --  JKD
44 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT3G45260
45 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AtIDD5; IDD5
46 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AtIDD4; IDD4
47 PDF2  --  interacts with  --  RGA1  --  interacts with  --  MGP
48 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ARF8
49 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ARF7
50 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ARF6
51 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT1G35560
52 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT1G72010
53 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT-TCP20; ATTCP20; PCF1; TCP20
54 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT2G45680
55 PDF2  --  interacts with  --  RGA1  --  interacts with  --  TCP8
56 PDF2  --  interacts with  --  RGA1  --  interacts with  --  GL3; GL3; MYC6.2
57 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATMYC-2; EGL1; EGL3
58 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATGL1; ATMYB0; GL1; MYB0
59 PDF2  --  interacts with  --  RGA1  --  interacts with  --  TMKL1
60 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATGID1A
61 PDF2  --  interacts with  --  RGA1  --  interacts with  --  JAZ1
62 PDF2  --  interacts with  --  RGA1  --  interacts with  --  JAZ9
63 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATEBP; EBP; ERF72; RAP2.3
64 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT5G62260
65 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT5G12190
66 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ABC1; ABCI8; ATABC1; ATNAP1; LAF6
67 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT3G13740
68 PDF2  --  interacts with  --  RGA1  --  interacts with  --  NDF4
69 PDF2  --  interacts with  --  RGA1  --  interacts with  --  FRL1
70 PDF2  --  interacts with  --  RGA1  --  interacts with  --  PAD1
71 PDF2  --  interacts with  --  RGA1  --  interacts with  --  PIF6; PIL2
72 PDF2  --  interacts with  --  RGA1  --  interacts with  --  spatula
73 PDF2  --  interacts with  --  RGA1  --  interacts with  --  PIF4
74 PDF2  --  interacts with  --  RGA1  --  interacts with  --  PIF3
75 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATHAM2; HAM2; LOM2
76 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATHAM1; HAM1; LOM1
77 PDF2  --  interacts with  --  RGA1  --  interacts with  --  BBX24; STO
78 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT5G59980
79 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATSAE2; EMB2764; SAE2
80 PDF2  --  interacts with  --  RGA1  --  interacts with  --  AT-SAE1-1; ATSAE1A; SAE1A
81 PDF2  --  interacts with  --  RGA1  --  interacts with  --  OTS1; ULP1D
82 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATMPK18; MPK18
83 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ENY; IDD1
84 PDF2  --  interacts with  --  RGA1  --  interacts with  --  SCL3
85 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ALC
86 PDF2  --  interacts with  --  RGA1  --  interacts with  --  SLY1
87 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATGID1C
88 PDF2  --  interacts with  --  RGA1  --  interacts with  --  ATGID1B
89 PDF2  --  interacts with  --  RGA1  --  is a member of  --  della family, transcription factor gene
90 PDF2  --  interacts with  --  RGA1  --  is a member of  --  RGA1 family100, transcription factor gene
91 PDF2  --  interacts with  --  RGA1  --  is a member of  --  RGA1 family99, transcription factor gene
92 PDF2  --  interacts with  --  RGA1  --  is a member of  --  polyubiquitinated della family, transcription factor gene
93 PDF2  --  interacts with  --  RGL2  --  is modified by  --  MPK16
94 PDF2  --  interacts with  --  APL; WDY  --  interacts with  --  PTF1; TCP13; TFPD
95 PDF2  --  interacts with  --  APL; WDY  --  interacts with  --  AT5G66770
96 PDF2  --  interacts with  --  APL; WDY  --  interacts with  --  AT4G29930
97 PDF2  --  interacts with  --  AT3G07270  --  interacts with  --  AT1G52770
98 PDF2  --  interacts with  --  AT3G07270  --  interacts with  --  MEL4; NPY4
99 PDF2  --  interacts with  --  AT3G07270  --  has product (in catalytic reaction)  --  7,8-Dihydroneopterin 3'-triphosphate
100 PDF2  --  interacts with  --  AT3G07270  --  has product (in catalytic reaction)  --  Formate
101 PDF2  --  regulates the expression of   --  PDF1  --  has similar expression pattern (mutual information value=1.04449) with  --  EDA17; HTH
102 PDF2  --  regulates the expression of   --  PDF1  --  has similar expression pattern (mutual information value=0.877846) with  --  CYP78A5; KLU
103 PDF2  --  regulates the expression of   --  PDF1  --  has similar expression pattern (mutual information value=0.836629) with  --  KCS19
104 PDF2  --  regulates the expression of   --  PDF1  --  has similar expression pattern (mutual information value=0.808777) with  --  FAR1
105 PDF2  --  regulates the expression of   --  PDF1  --  has similar expression pattern (mutual information value=1.12715) with  --  AT5G45670
106 PDF2  --  regulates the expression of   --  PDF1  --  has similar expression pattern (mutual information value=0.827862) with  --  ATSBT1.3; SBT1.3
107 PDF2  --  has similar expression pattern (mutual information value=0.864768) with  --  LTPG1  --  has similar expression pattern (mutual information value=0.811812) with  --  ABCG11; AtABCG11; ATWBC11; COF1; DSO; WBC11
108 PDF2  --  has similar expression pattern (mutual information value=0.864768) with  --  LTPG1  --  has similar expression pattern (mutual information value=1.06114) with  --  ATECI3; ECI3; HCD1
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