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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PDF1
Type: Protein GRN ID: np23224 Name: PDF1
Annotation: PDF1 | protodermal factor 1
Gene Locus: AT2G42840
Gene Expression (Affy ATH1 probeset): 263979_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PDF1  --  is regulated by  --  ATML1
3 PDF1  --  is regulated by  --  PDF2
4 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10
5 PDF1  --  has similar expression pattern (mutual information value=1.04449) with  --  EDA17; HTH
6 PDF1  --  has similar expression pattern (mutual information value=0.877846) with  --  CYP78A5; KLU
7 PDF1  --  has similar expression pattern (mutual information value=0.836629) with  --  KCS19
8 PDF1  --  has similar expression pattern (mutual information value=0.808777) with  --  FAR1
9 PDF1  --  has similar expression pattern (mutual information value=1.12715) with  --  AT5G45670
10 PDF1  --  has similar expression pattern (mutual information value=0.827862) with  --  ATSBT1.3; SBT1.3
11 PDF1  --  is regulated by  --  ATML1  --  interacts with  --  RGA1
12 PDF1  --  is regulated by  --  ATML1  --  interacts with  --  RGL2
13 PDF1  --  is regulated by  --  PDF2  --  interacts with  --  AT5G38420
14 PDF1  --  is regulated by  --  PDF2  --  interacts with  --  APL; WDY
15 PDF1  --  is regulated by  --  PDF2  --  interacts with  --  AT3G07270
16 PDF1  --  is regulated by  --  PDF2  --  has similar expression pattern (mutual information value=0.864768) with  --  LTPG1
17 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  interacts with  --  CERK1; LYSM RLK1
18 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
19 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=1.01593) with  --  ABCG32; ATPDR4; PDR4; PEC1
20 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=0.88145) with  --  KCS8
21 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=0.864417) with  --  AT1G33811
22 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=0.879839) with  --  BDG1; CED1
23 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=1.1485) with  --  ABCG11; AtABCG11; ATWBC11; COF1; DSO; WBC11
24 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=0.87964) with  --  CER2; VC-2; VC2
25 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=1.125) with  --  ABCB2; PGP2
26 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=1.17013) with  --  AT3G43720
27 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=0.914746) with  --  AT5G13400
28 PDF1  --  has similar expression pattern (mutual information value=0.873466) with  --  FDH; KCS10  --  has similar expression pattern (mutual information value=0.915073) with  --  HHP1
29 PDF1  --  has similar expression pattern (mutual information value=1.04449) with  --  EDA17; HTH  --  has similar expression pattern (mutual information value=0.945257) with  --  ATLTL1; LTL1
30 PDF1  --  has similar expression pattern (mutual information value=1.04449) with  --  EDA17; HTH  --  has similar expression pattern (mutual information value=0.899874) with  --  AT4G29020
31 PDF1  --  has similar expression pattern (mutual information value=1.04449) with  --  EDA17; HTH  --  has similar expression pattern (mutual information value=0.859062) with  --  AT1G35170
32 PDF1  --  has similar expression pattern (mutual information value=1.04449) with  --  EDA17; HTH  --  has similar expression pattern (mutual information value=0.859062) with  --  AT1G35180
33 PDF1  --  has similar expression pattern (mutual information value=0.836629) with  --  KCS19  --  has similar expression pattern (mutual information value=0.900057) with  --  AT4G18970
34 PDF1  --  has similar expression pattern (mutual information value=1.12715) with  --  AT5G45670  --  has similar expression pattern (mutual information value=0.854099) with  --  AtHB31; HB31; ZHD4
35 PDF1  --  has similar expression pattern (mutual information value=1.12715) with  --  AT5G45670  --  has similar expression pattern (mutual information value=0.811001) with  --  AT1G06350
36 PDF1  --  has similar expression pattern (mutual information value=1.12715) with  --  AT5G45670  --  has similar expression pattern (mutual information value=0.811001) with  --  AT1G06360
37 PDF1  --  has similar expression pattern (mutual information value=0.827862) with  --  ATSBT1.3; SBT1.3  --  has similar expression pattern (mutual information value=0.806397) with  --  SPCH
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