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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G28050
Type: Protein GRN ID: np42570 Name:
Annotation: Cytidine/deoxycytidylate deaminase family protein
Gene Locus: AT5G28050
Gene Expression (Affy ATH1 probeset): 246702_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G28050  --  interacts with  --  AT5G38420
3 AT5G28050  --  interacts with  --  AT5G38420  --  has product (in catalytic reaction)  --  D-Ribulose 1,5-bisphosphate
4 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AT1G09660
5 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  BOP2
6 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  ARF16
7 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AT3G14120
8 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  ACD31.2; ACD32.1
9 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AT3G27960
10 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  LSU2
11 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  JAI3
12 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  BP; BP1; KNAT1
13 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AT1G01440
14 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AT4G17680
15 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G32440
16 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  PDF2
17 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  SEC
18 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  LSU1
19 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AtTCP11; TCP11
20 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  BLH1; EDA29
21 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  ATHDG11; EDT1; HDG11
22 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AtTCP15; TCP15
23 AT5G28050  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G11980
24 AT5G28050  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02909) with  --  DRT112; PETE2
25 AT5G28050  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02964) with  --  AT5G28450
26 AT5G28050  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02964) with  --  LHCA2
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