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Location:  Home > Details for node AT1G53180
Type: Protein GRN ID: np11740 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Gene Locus: AT1G53180
Gene Expression (Affy ATH1 probeset): 260639_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090
3 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380
4 AT1G53180  --  has similar expression pattern (mutual information value=0.925289) with  --  AT2G41780
5 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140
6 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220
7 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630
8 AT1G53180  --  has similar expression pattern (mutual information value=0.862297) with  --  AT5G43060
9 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.45955) with  --  EDA3
10 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.20603) with  --  ARASP
11 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.32256) with  --  AT2G34460
12 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.40072) with  --  CRR3
13 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.49718) with  --  ZKT
14 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.41823) with  --  TLP18.3
15 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.45407) with  --  AT2G05310
16 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.45407) with  --  AT4G13500
17 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=0.920735) with  --  ATCSLA10; CSLA10; CSLA10
18 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.21923) with  --  Aty2; ty2
19 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.17281) with  --  AT1G06690
20 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.17596) with  --  AT1G64150
21 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=0.882433) with  --  AT1G56145
22 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.31097) with  --  AT1G64680
23 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.20356) with  --  AT1G71810
24 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=0.801007) with  --  STOP1
25 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.24042) with  --  AT1G76730
26 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.2599) with  --  AT1G52220
27 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.64349) with  --  AT1G29700
28 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.26583) with  --  AT3G01060
29 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.44576) with  --  AT3G10060
30 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.51126) with  --  ATF1; TRXF1
31 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=0.915381) with  --  AT3G17930
32 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.22608) with  --  AT3G26080
33 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.22608) with  --  AT3G26070
34 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.26305) with  --  AT1G18060
35 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.17387) with  --  AT4G11175
36 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.45378) with  --  PGR5-LIKE A
37 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.20727) with  --  AT4G33500
38 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.32906) with  --  AT3G51510
39 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.15391) with  --  OHP; PDE335
40 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=0.974911) with  --  AT5G02830
41 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.38219) with  --  AT5G07020
42 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.53309) with  --  AT5G08650
43 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=0.942975) with  --  ATSS1; SS1; SSI; SSI1
44 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.40994) with  --  AT5G37360
45 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.53824) with  --  AT5G38520
46 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.44982) with  --  APE1
47 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.20125) with  --  DXR; PDE129
48 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.26772) with  --  AT5G62840
49 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.01158) with  --  MEX1; RCP1
50 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=0.957044) with  --  AT4G36530
51 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.39354) with  --  AT5G20140
52 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.41746) with  --  LHCA5
53 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.43694) with  --  AT1G32160
54 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.3652) with  --  AT1G32220
55 AT1G53180  --  has similar expression pattern (mutual information value=0.868684) with  --  AT1G77090  --  has similar expression pattern (mutual information value=1.09749) with  --  AT1G51110
56 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=0.961387) with  --  ATSIG6; SIG6; SIGF; SOLDAT8
57 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.02827) with  --  AT2G04700
58 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.13482) with  --  FUG1
59 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=0.942605) with  --  PDE318
60 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.05307) with  --  AT3G07670
61 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.035) with  --  AT3G04760
62 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.03367) with  --  AT3G02690
63 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=0.972197) with  --  AT3G02450
64 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.26858) with  --  AT3G29185
65 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.18451) with  --  NARA5
66 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.05887) with  --  AT4G34090
67 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.03311) with  --  AT3G43540
68 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.07659) with  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
69 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=0.978265) with  --  DEG8; DEGP8
70 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.02464) with  --  AtPLR1; PLR1
71 AT1G53180  --  has similar expression pattern (mutual information value=0.837417) with  --  AT1G49380  --  has similar expression pattern (mutual information value=1.00932) with  --  APO2; emb1629
72 AT1G53180  --  has similar expression pattern (mutual information value=0.925289) with  --  AT2G41780  --  has similar expression pattern (mutual information value=0.816496) with  --  AT1G36060
73 AT1G53180  --  has similar expression pattern (mutual information value=0.925289) with  --  AT2G41780  --  has similar expression pattern (mutual information value=0.816084) with  --  ACA3; ATECA1; ECA1
74 AT1G53180  --  has similar expression pattern (mutual information value=0.925289) with  --  AT2G41780  --  has similar expression pattern (mutual information value=0.802223) with  --  AT2G21850
75 AT1G53180  --  has similar expression pattern (mutual information value=0.925289) with  --  AT2G41780  --  has similar expression pattern (mutual information value=0.891687) with  --  AT4G28025
76 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.805973) with  --  CYP76C1
77 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.13868) with  --  AT2G30170
78 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.802664) with  --  AT2G39300
79 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.24022) with  --  AT1G02475
80 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.911737) with  --  AT1G36320
81 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.944474) with  --  AT3G18500
82 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.15896) with  --  AT1G20810
83 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.01281) with  --  AT4G13200
84 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=0.964189) with  --  AT4G27390
85 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.22585) with  --  AT3G56650
86 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  has similar expression pattern (mutual information value=1.10783) with  --  AT5G65840
87 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  transport  --  UDP-N-acetyl-D-galactosamine
88 AT1G53180  --  has similar expression pattern (mutual information value=0.904615) with  --  AT1G28140  --  transport  --  UDP-glucuronate
89 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  interacts with  --  AtGPAT8; GPAT8
90 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=1.02456) with  --  AT1G11430
91 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.921467) with  --  ABCI12
92 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=1.08716) with  --  AT3G20230
93 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.942342) with  --  AtTic22-IV; Tic22-IV
94 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=1.10971) with  --  AT5G42765
95 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.80851) with  --  ATFH5; Fh5
96 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.878902) with  --  AT5G55580
97 AT1G53180  --  has similar expression pattern (mutual information value=0.814252) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.880012) with  --  AT1G45230
98 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.12536) with  --  PSBW
99 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.19223) with  --  AT2G26340
100 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630  --  has similar expression pattern (mutual information value=0.911414) with  --  AT1G07440
101 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.4009) with  --  PIFI
102 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.33661) with  --  AT5G03880
103 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630  --  has similar expression pattern (mutual information value=0.895368) with  --  CIPK20/CIPK15
104 AT1G53180  --  has similar expression pattern (mutual information value=0.855773) with  --  AT3G46630  --  has similar expression pattern (mutual information value=1.26858) with  --  ATLDA; ATPU1; LDA; PU1
105 AT1G53180  --  has similar expression pattern (mutual information value=0.862297) with  --  AT5G43060  --  has similar expression pattern (mutual information value=0.951275) with  --  ATWRKY36; WRKY36
106 AT1G53180  --  has similar expression pattern (mutual information value=0.862297) with  --  AT5G43060  --  interacts with  --  ATPDI5; ATPDIL1-1; PDI5; PDIL1-1
107 AT1G53180  --  has similar expression pattern (mutual information value=0.862297) with  --  AT5G43060  --  is the target gene of  --  ath-miR396b
108 AT1G53180  --  has similar expression pattern (mutual information value=0.862297) with  --  AT5G43060  --  is the target gene of  --  ath-miR396a
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