Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node Xylose
Type: Compound GRN ID: nc51394 Name: Xylose
Annotation: Xylose
KEGG Acc.: C01394
CHEBI ID:
Formula: C5H10O5
M.W.: 150.1299
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 Xylose  --  is transported by  --  AT3G59820
3 Xylose  --  is transported by  --  AtSAC9; SAC9
4 Xylose  --  is transported by  --  AT3G58760
5 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260
6 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4
7 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.855835) with  --  HCC1
8 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.856991) with  --  AT4G30840
9 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.859838) with  --  AT3G43510
10 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.891361) with  --  AT3G49320
11 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240
12 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.89055) with  --  EMB3007
13 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3
14 Xylose  --  is transported by  --  AT3G59820  --  has similar expression pattern (mutual information value=0.999831) with  --  LON1; LON_ARA_ARA
15 Xylose  --  is transported by  --  AT3G59820  --  transport  --  Galactose
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact