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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G56720
Type: Protein GRN ID: np30662 Name:
Annotation: unknown protein; Has 6239 Blast hits to 4635 proteins in 365 species: Archae - 6; Bacteria - 230; Metazoa - 3389; Fungi - 659; Plants - 656; Viruses - 13; Other Eukaryotes - 1286 (source: NCBI BLink).
Gene Locus: AT3G56720
Gene Expression (Affy ATH1 probeset): 246343_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G56720  --  has similar expression pattern (mutual information value=0.817517) with  --  ATSERAT3;1; SAT-106
3 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910
4 AT3G56720  --  has similar expression pattern (mutual information value=0.833778) with  --  ATBPC6; BBR/BPC6; BPC6
5 AT3G56720  --  has similar expression pattern (mutual information value=0.817517) with  --  ATSERAT3;1; SAT-106  --  has similar expression pattern (mutual information value=0.8337) with  --  AT5G51170
6 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.821673) with  --  AT1G61620
7 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=1.13145) with  --  emb1220
8 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=1.13145) with  --  AT3G60610
9 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.941641) with  --  AT3G10030
10 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.904788) with  --  AT3G04560
11 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.931725) with  --  OBF5
12 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.870452) with  --  AT5G49880
13 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.90917) with  --  FIP2
14 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.836645) with  --  AT5G10710
15 AT3G56720  --  has similar expression pattern (mutual information value=0.824176) with  --  AT5G04910  --  has similar expression pattern (mutual information value=0.907376) with  --  AT4G16440
16 AT3G56720  --  has similar expression pattern (mutual information value=0.833778) with  --  ATBPC6; BBR/BPC6; BPC6  --  interacts with  --  ATBPC4; BBR; BPC4
17 AT3G56720  --  has similar expression pattern (mutual information value=0.833778) with  --  ATBPC6; BBR/BPC6; BPC6  --  interacts with  --  ATBPC1; BBR; BPC1
18 AT3G56720  --  has similar expression pattern (mutual information value=0.833778) with  --  ATBPC6; BBR/BPC6; BPC6  --  has similar expression pattern (mutual information value=0.802672) with  --  SUE3; VIP1
19 AT3G56720  --  has similar expression pattern (mutual information value=0.833778) with  --  ATBPC6; BBR/BPC6; BPC6  --  has similar expression pattern (mutual information value=0.861371) with  --  AT3G09850
20 AT3G56720  --  has similar expression pattern (mutual information value=0.833778) with  --  ATBPC6; BBR/BPC6; BPC6  --  has similar expression pattern (mutual information value=0.814959) with  --  AT3G53410
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