Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node emb2458
Type: Protein GRN ID: np25123 Name: emb2458
Annotation: emb2458 | FtsH extracellular protease family [TCDB:3.A.18.1]
Gene Locus: AT3G04340
Gene Expression (Affy ATH1 probeset): 258585_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1
3 emb2458  --  has similar expression pattern (mutual information value=0.808378) with  --  ATSRS; OVA7; SRS
4 emb2458  --  has similar expression pattern (mutual information value=0.865848) with  --  ATTIC110; TIC110
5 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083
6 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  interacts with  --  AT3G22550
7 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
8 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.10852) with  --  OVA4
9 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.01315) with  --  AT1G70200
10 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.08801) with  --  GATB
11 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.0427) with  --  GLYR2; GR2
12 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.22949) with  --  AT3G08740
13 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=0.927432) with  --  emb2768
14 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.09221) with  --  AT3G13180
15 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.07409) with  --  EMB2369
16 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.3363) with  --  emb2726
17 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.03461) with  --  AT3G51140
18 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.03767) with  --  AT3G53560
19 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.14688) with  --  FSD3
20 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=0.997648) with  --  OVA2
21 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=0.942765) with  --  OVA6; PRORS1
22 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=0.843965) with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2
23 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=0.99788) with  --  EMB3144
24 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.06708) with  --  AT5G66470
25 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=0.994286) with  --  EMB2247
26 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  has similar expression pattern (mutual information value=1.11393) with  --  PHR2
27 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  transport  --  5-FU
28 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  transport  --  Allantoin
29 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  transport  --  Xanthine
30 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  transport  --  Urate
31 emb2458  --  has similar expression pattern (mutual information value=0.978192) with  --  CPN60B; LEN1  --  transport  --  Uracil
32 emb2458  --  has similar expression pattern (mutual information value=0.808378) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=1.02645) with  --  AT2G39670
33 emb2458  --  has similar expression pattern (mutual information value=0.808378) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=1.01333) with  --  EMB1047; EMB156; EMB36; FTSH12
34 emb2458  --  has similar expression pattern (mutual information value=0.808378) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=0.808867) with  --  PDE326; PNP; RIF10
35 emb2458  --  has similar expression pattern (mutual information value=0.808378) with  --  ATSRS; OVA7; SRS  --  has product (in catalytic reaction)  --  L-Seryl-tRNA(Ser)
36 emb2458  --  has similar expression pattern (mutual information value=0.865848) with  --  ATTIC110; TIC110  --  has similar expression pattern (mutual information value=0.817238) with  --  AT3G58610
37 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.15518) with  --  HMR; PTAC12
38 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.05355) with  --  ATRAP; RAP
39 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=0.952702) with  --  AT3G07670
40 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.09749) with  --  PDE324; PTAC3
41 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=0.888827) with  --  EMB1270
42 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=0.918964) with  --  TRZ4
43 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=0.877667) with  --  AT3G28460
44 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.00758) with  --  AT3G18680
45 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.15334) with  --  AT4G23940
46 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.03266) with  --  ATPPR5; EMB2453
47 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.01148) with  --  FLN1
48 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.11797) with  --  ATOBGC; ATOBGL; CPSAR1; EMB269; EMB3138
49 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.08941) with  --  EMB139; EMB506
50 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=0.976126) with  --  ARC6
51 emb2458  --  has similar expression pattern (mutual information value=0.970489) with  --  EMB2083  --  has similar expression pattern (mutual information value=1.01293) with  --  AT5G46580
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact