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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G27900
Type: Protein GRN ID: np22223 Name:
Annotation: CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Gene Locus: AT2G27900
Gene Expression (Affy ATH1 probeset): 264064_at    264063_at    264065_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070
3 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800
4 AT2G27900  --  has similar expression pattern (mutual information value=0.937829) with  --  AT5G24710
5 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.90044) with  --  AT2G02515
6 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=1.0678) with  --  AT2G18820
7 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.814403) with  --  AT2G16835
8 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.821759) with  --  AT2G15720
9 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.863049) with  --  LLG2
10 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.915889) with  --  AT2G16690
11 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.87736) with  --  AT1G24640
12 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.845939) with  --  AT2G17910
13 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.922535) with  --  AT2G16000
14 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.86138) with  --  ARF12
15 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.985829) with  --  AtMYB113; MYB113
16 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.979443) with  --  AT1G42650
17 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.803834) with  --  AT5G28550
18 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=1.00278) with  --  AT4G03950
19 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.854384) with  --  AtENODL12; ENODL12
20 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.867168) with  --  DOF4.7
21 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.984754) with  --  AT5G10420
22 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.926146) with  --  AT5G47130
23 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=1.15609) with  --  AT5G54220
24 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.829259) with  --  ABCG28
25 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.943734) with  --  AT5G35300
26 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.896217) with  --  AT5G20760
27 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=1.07) with  --  ATPUP3; PUP3
28 AT2G27900  --  has similar expression pattern (mutual information value=0.808895) with  --  AT2G07070  --  has similar expression pattern (mutual information value=0.942081) with  --  AT4G15750
29 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.813502) with  --  LBD10
30 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.978137) with  --  AT2G25565
31 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.07341) with  --  AT2G10740
32 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.928167) with  --  GLOX1
33 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.852278) with  --  AT1G60460
34 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.815541) with  --  AT2G04560
35 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.848536) with  --  AT2G16110
36 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.875865) with  --  AT1G36970
37 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.14179) with  --  AT1G34440
38 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.902959) with  --  AT1G48095
39 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.87088) with  --  AT3G25260
40 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.941241) with  --  AT3G30280
41 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.04353) with  --  AT2G33260
42 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.901219) with  --  AT4G04000
43 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.11629) with  --  sks10
44 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.939705) with  --  AT3G42140
45 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.08049) with  --  AT3G42770
46 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.911985) with  --  AT3G46360
47 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.01639) with  --  AT3G49480
48 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.836249) with  --  AT5G08090
49 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.943467) with  --  AT5G18880
50 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.997167) with  --  AT5G54350
51 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.999809) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80
52 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.843164) with  --  AT5G09370
53 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.909978) with  --  AT1G56675
54 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.909978) with  --  AT4G09146
55 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.993353) with  --  AT4G17580
56 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.846651) with  --  AT1G38149
57 AT2G27900  --  has similar expression pattern (mutual information value=0.804133) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.846651) with  --  AT1G38340
58 AT2G27900  --  has similar expression pattern (mutual information value=0.937829) with  --  AT5G24710  --  has similar expression pattern (mutual information value=0.838665) with  --  AT2G43160
59 AT2G27900  --  has similar expression pattern (mutual information value=0.937829) with  --  AT5G24710  --  has similar expression pattern (mutual information value=1.03663) with  --  KAK; UPL3
60 AT2G27900  --  has similar expression pattern (mutual information value=0.937829) with  --  AT5G24710  --  interacts with  --  NDL1
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