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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G04000
Type: non-coding-other GRN ID: nn04278 Name:
Annotation: transposable element gene
Gene Locus: AT4G04000
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565
3 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800
4 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220
5 AT4G04000  --  has similar expression pattern (mutual information value=0.816672) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80
6 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.805845) with  --  AT2G27520
7 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.909575) with  --  AT2G15870
8 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.875796) with  --  AT2G15720
9 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.890771) with  --  LLG2
10 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.913299) with  --  GLOX1
11 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.906073) with  --  AT2G17910
12 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.843445) with  --  AT2G13510
13 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.826825) with  --  AT3G04170
14 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=1.0397) with  --  AT1G42650
15 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.929902) with  --  AT2G33260
16 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.871444) with  --  AT4G04690
17 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.889665) with  --  TMT3
18 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.883794) with  --  ATATG18E; ATG18E; G18E
19 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.822518) with  --  FLA21
20 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.82387) with  --  AT5G08090
21 AT4G04000  --  has similar expression pattern (mutual information value=0.836437) with  --  AT2G25565  --  has similar expression pattern (mutual information value=0.87121) with  --  AT5G20760
22 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.813502) with  --  LBD10
23 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.988314) with  --  AT2G02515
24 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.07341) with  --  AT2G10740
25 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.928749) with  --  AT2G16690
26 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.88355) with  --  AT1G24640
27 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.852278) with  --  AT1G60460
28 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.804133) with  --  AT2G27900
29 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.815541) with  --  AT2G04560
30 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.914586) with  --  AT2G16000
31 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.848536) with  --  AT2G16110
32 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.875865) with  --  AT1G36970
33 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.14179) with  --  AT1G34440
34 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.902959) with  --  AT1G48095
35 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.87088) with  --  AT3G25260
36 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.941241) with  --  AT3G30280
37 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.957128) with  --  AT4G03950
38 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.11629) with  --  sks10
39 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.939705) with  --  AT3G42140
40 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.08049) with  --  AT3G42770
41 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.911985) with  --  AT3G46360
42 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=1.01639) with  --  AT3G49480
43 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.943467) with  --  AT5G18880
44 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.997167) with  --  AT5G54350
45 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.965823) with  --  AT5G35300
46 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.843164) with  --  AT5G09370
47 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.909978) with  --  AT1G56675
48 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.909978) with  --  AT4G09146
49 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.993353) with  --  AT4G17580
50 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.846651) with  --  AT1G38149
51 AT4G04000  --  has similar expression pattern (mutual information value=0.901219) with  --  AT5G43800  --  has similar expression pattern (mutual information value=0.846651) with  --  AT1G38340
52 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.05373) with  --  AT2G22950
53 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.13529) with  --  AT2G18820
54 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.866075) with  --  AT2G18970
55 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.15609) with  --  AT2G07070
56 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.843026) with  --  AT2G29370
57 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.805574) with  --  ATCKX2
58 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.964992) with  --  AT2G18590
59 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.82051) with  --  AT1G62210
60 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.996992) with  --  PRA1.G1
61 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.908592) with  --  AT2G20460
62 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.15795) with  --  AT1G36150
63 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.800821) with  --  ARF12
64 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.836134) with  --  ATSTP9; STP9
65 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.19644) with  --  AT1G35617
66 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.800678) with  --  AT1G15600
67 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.825128) with  --  AtMYB117; LOF1; MYB117
68 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.967218) with  --  AtMYB113; MYB113
69 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.834679) with  --  AT1G72131
70 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.838754) with  --  MAP3KE1; MAPKKK7
71 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.838754) with  --  MAP3KE2; MAPKKK6
72 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.04291) with  --  AT3G27590
73 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.08523) with  --  AT3G25720
74 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.06811) with  --  AT3G26614
75 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.09692) with  --  AT2G35080
76 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.976438) with  --  AT3G21410
77 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.807548) with  --  AT1G35880
78 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.0945) with  --  AT3G08490
79 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.866843) with  --  AT5G28600
80 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.806111) with  --  AT4G08370
81 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.802413) with  --  AT4G26730
82 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.802413) with  --  AT2G16030
83 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.83675) with  --  AT3G43900
84 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.873591) with  --  AT3G45720
85 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.889086) with  --  AGP23; ATAGP23
86 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.845315) with  --  AT3G58890
87 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.08279) with  --  AT5G10420
88 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.84318) with  --  AT5G40050
89 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.08602) with  --  AtRLP55; RLP55
90 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.880245) with  --  AT5G47130
91 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.822995) with  --  AT5G48210
92 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.83149) with  --  AT5G55650
93 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.00917) with  --  AT5G57720
94 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.829016) with  --  ABCG28
95 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.90846) with  --  ASD2; ATASD2
96 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.962861) with  --  AT5G27510
97 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.07944) with  --  AT5G19810
98 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.07979) with  --  ATPUP3; PUP3
99 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.926669) with  --  AT4G15750
100 AT4G04000  --  has similar expression pattern (mutual information value=0.828213) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.927888) with  --  AT4G14815
101 AT4G04000  --  has similar expression pattern (mutual information value=0.816672) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80  --  has similar expression pattern (mutual information value=0.898613) with  --  AGL5; SHP2
102 AT4G04000  --  has similar expression pattern (mutual information value=0.816672) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80  --  has similar expression pattern (mutual information value=0.951959) with  --  AT1G31100
103 AT4G04000  --  has similar expression pattern (mutual information value=0.816672) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80  --  has similar expression pattern (mutual information value=0.907567) with  --  AT4G05620
104 AT4G04000  --  has similar expression pattern (mutual information value=0.816672) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80  --  has similar expression pattern (mutual information value=0.889298) with  --  AT3G42820
105 AT4G04000  --  has similar expression pattern (mutual information value=0.816672) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80  --  has similar expression pattern (mutual information value=0.810511) with  --  AT3G49150
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