Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G43160
Type: Protein GRN ID: np20849 Name:
Annotation: ENTH/VHS family protein
Gene Locus: AT2G43160
Gene Expression (Affy ATH1 probeset): 266437_at    266436_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G43160  --  interacts with  --  ATVTI12; VTI12; VTI1B
3 AT2G43160  --  interacts with  --  delta-ADR; PAT4
4 AT2G43160  --  interacts with  --  alpha-ADR
5 AT2G43160  --  has similar expression pattern (mutual information value=1.11266) with  --  AT2G07360
6 AT2G43160  --  has similar expression pattern (mutual information value=0.829907) with  --  AT1G09980
7 AT2G43160  --  has similar expression pattern (mutual information value=0.838665) with  --  AT5G24710
8 AT2G43160  --  interacts with  --  ATVTI12; VTI12; VTI1B  --  interacts with  --  GLT1; PGLCT
9 AT2G43160  --  interacts with  --  ATVTI12; VTI12; VTI1B  --  interacts with  --  ATSYP41; ATTLG2A; SYP41
10 AT2G43160  --  interacts with  --  alpha-ADR  --  interacts with  --  AT1G05020
11 AT2G43160  --  has similar expression pattern (mutual information value=0.829907) with  --  AT1G09980  --  interacts with  --  ARR14
12 AT2G43160  --  has similar expression pattern (mutual information value=0.838665) with  --  AT5G24710  --  has similar expression pattern (mutual information value=0.937829) with  --  AT2G27900
13 AT2G43160  --  has similar expression pattern (mutual information value=0.838665) with  --  AT5G24710  --  has similar expression pattern (mutual information value=1.03663) with  --  KAK; UPL3
14 AT2G43160  --  has similar expression pattern (mutual information value=0.838665) with  --  AT5G24710  --  interacts with  --  NDL1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact