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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G19540
Type: Protein GRN ID: np36826 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G19540
Gene Expression (Affy ATH1 probeset): 245948_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130
3 AT5G19540  --  has similar expression pattern (mutual information value=0.97183) with  --  AT2G44870
4 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490
5 AT5G19540  --  has similar expression pattern (mutual information value=0.90923) with  --  AT2G35450
6 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110
7 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.12525) with  --  ATFC-II; FC-II; FC2
8 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.980348) with  --  AT2G38330
9 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.11869) with  --  ATCDPMEK; CDPMEK; ISPE; PDE277
10 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.972303) with  --  AT2G03420
11 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.843433) with  --  AT2G04360
12 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.17593) with  --  ATSULA; GC1; SULA
13 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.08153) with  --  CCB4
14 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.14) with  --  AT1G64150
15 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.990096) with  --  AT1G63610
16 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.17752) with  --  ISPF; MECPS
17 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.910251) with  --  MAP1B; MAP1C
18 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.947013) with  --  AT3G17930
19 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.984438) with  --  AT1G66820
20 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.20513) with  --  AT4G10300
21 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.05174) with  --  DEG5; DEGP5; HHOA
22 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.2016) with  --  AT3G47650
23 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.04139) with  --  GSTL2
24 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.971283) with  --  AT5G17670
25 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=0.925107) with  --  PCB2
26 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.14369) with  --  ARRPS1; RPS1
27 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.03744) with  --  DHAR3
28 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.04259) with  --  CYP97A3; LUT5
29 AT5G19540  --  has similar expression pattern (mutual information value=0.822423) with  --  AT2G42130  --  has similar expression pattern (mutual information value=1.10268) with  --  AT1G26230
30 AT5G19540  --  has similar expression pattern (mutual information value=0.97183) with  --  AT2G44870  --  has similar expression pattern (mutual information value=0.801135) with  --  AT2G36835
31 AT5G19540  --  has similar expression pattern (mutual information value=0.97183) with  --  AT2G44870  --  has similar expression pattern (mutual information value=0.811956) with  --  IMPL1
32 AT5G19540  --  has similar expression pattern (mutual information value=0.97183) with  --  AT2G44870  --  has similar expression pattern (mutual information value=0.803359) with  --  AT2G17240
33 AT5G19540  --  has similar expression pattern (mutual information value=0.97183) with  --  AT2G44870  --  has similar expression pattern (mutual information value=0.855999) with  --  AT-RSH1; ATRSH1; RSH1
34 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.3498) with  --  EDA3
35 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.00556) with  --  AT2G26900
36 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.25189) with  --  AT2G35410
37 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.28378) with  --  GDCH
38 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.30829) with  --  AT2G27680
39 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.26882) with  --  PSB29; THF1
40 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.854903) with  --  AT1G60230
41 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.39272) with  --  FBA1
42 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.963488) with  --  AT2G17033
43 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.02987) with  --  AtTic55; Tic55; TIC55-II
44 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.27205) with  --  AT2G36145
45 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.14831) with  --  APG2; PGA2; TATC; UNE3
46 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.24223) with  --  AT1G29700
47 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.3621) with  --  AT3G10060
48 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.42565) with  --  ATF1; TRXF1
49 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.29255) with  --  Deg1; DEGP1
50 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.33638) with  --  AT3G15110
51 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.924715) with  --  ATSS4; SS4; SSIV
52 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.31211) with  --  AT4G22830
53 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.997778) with  --  MRL1; PDE346
54 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.34875) with  --  HCEF1
55 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.33573) with  --  PPL1
56 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.38377) with  --  AT3G56650
57 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.34758) with  --  AT5G07020
58 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.920175) with  --  SVR3
59 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.947588) with  --  ATSS1; SS1; SSI; SSI1
60 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.25305) with  --  AT5G51110
61 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.993406) with  --  HCF106
62 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.10767) with  --  THI1; THI4; TZ
63 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.04573) with  --  ACD2; ATRCCR
64 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.28239) with  --  AT5G20140
65 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.32158) with  --  AT1G32160
66 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.01753) with  --  NDC1
67 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.27783) with  --  ATLDA; ATPU1; LDA; PU1
68 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=1.20733) with  --  AT4G17560
69 AT5G19540  --  has similar expression pattern (mutual information value=0.847172) with  --  AT2G35490  --  has similar expression pattern (mutual information value=0.913424) with  --  HISN5B
70 AT5G19540  --  has similar expression pattern (mutual information value=0.90923) with  --  AT2G35450  --  has similar expression pattern (mutual information value=0.826085) with  --  AT2G32500
71 AT5G19540  --  has similar expression pattern (mutual information value=0.90923) with  --  AT2G35450  --  has similar expression pattern (mutual information value=0.849195) with  --  AT2G44920
72 AT5G19540  --  has similar expression pattern (mutual information value=0.90923) with  --  AT2G35450  --  has similar expression pattern (mutual information value=0.884151) with  --  AT1G12250
73 AT5G19540  --  has similar expression pattern (mutual information value=0.90923) with  --  AT2G35450  --  has similar expression pattern (mutual information value=0.814055) with  --  AT3G32930
74 AT5G19540  --  has similar expression pattern (mutual information value=0.90923) with  --  AT2G35450  --  has similar expression pattern (mutual information value=1.01868) with  --  AT4G08280
75 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=0.920234) with  --  AT2G29360
76 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=0.848588) with  --  AT2G21385
77 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=0.970736) with  --  AT1G65230
78 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.15618) with  --  AT2G32640
79 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.18454) with  --  AT2G34460
80 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.09749) with  --  AT1G77090
81 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.12283) with  --  AT2G21340
82 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.30622) with  --  AT1G52510
83 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.12226) with  --  AT1G21350
84 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.26221) with  --  AT2G43560
85 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=0.907695) with  --  ATNSI; NSI
86 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.02587) with  --  AT3G44620
87 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.12967) with  --  AT5G65840
88 AT5G19540  --  has similar expression pattern (mutual information value=0.89705) with  --  AT1G51110  --  has similar expression pattern (mutual information value=1.21533) with  --  AT5G27290
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