Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G76870
Type: Protein GRN ID: np15406 Name:
Annotation: BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink).
Gene Locus: AT1G76870
Gene Expression (Affy ATH1 probeset): 256330_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G76870  --  interacts with  --  CHR3; SYD
3 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  LBD35
4 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  LBD40
5 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  ARF18
6 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  ARF3
7 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  HSI2; VAL1
8 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  AT1G51120
9 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  AT1G50680
10 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  ATE2FA; E2F3
11 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  HMGB4; NFD04; NFD4
12 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  TCP5
13 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  AT5G51910
14 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  TCP16
15 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  PTF1; TCP13; TFPD
16 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  AT1G72010
17 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  TCP3
18 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  FAF1
19 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  ARLIM15; ATDMC1; DMC1
20 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  NF-YA5; NFYA5
21 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  AT2G26940
22 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  KNAT3
23 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  anac046; NAC046
24 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  RSL4
25 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  RSL2
26 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  TOE2
27 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  Rap2.6L
28 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  AtbZIP70; bZIP70
29 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  ATBZIP42; bZIP42
30 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  AtbZIP3; bZIP3
31 AT1G76870  --  interacts with  --  CHR3; SYD  --  interacts with  --  LFY
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact