Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node SHM6
Type: Protein GRN ID: np15302 Name: SHM6
Annotation: SHM6 | serine hydroxymethyltransferase 6 [EC:2.1.2.1]
Gene Locus: AT1G22020
Gene Expression (Affy ATH1 probeset): 255946_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate
3 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  has product (in catalytic reaction)  --  10-Formyltetrahydrofolate
4 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  has product (in catalytic reaction)  --  5,10-Methylenetetrahydrofolate
5 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  has product (in catalytic reaction)  --  Dihydrofolate
6 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  AT5G47435
7 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  AT4G17360
8 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  PANB2
9 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  3-Methyl-2-oxobutanoic acid
10 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  KPHMT1; PANB1
11 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  pde194
12 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  AT2G35040
13 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
14 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  AT1G31220
15 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  5'-Phosphoribosylglycinamide
16 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  SHM2
17 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  SHM1; SHMT1; STM
18 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  AtSHMT3; SHM3
19 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  SHM4
20 SHM6  --  has product (in catalytic reaction)  --  Tetrahydrofolate  --  is product (in catalytic reaction) of  --  SHM7
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab