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Location:  Home > Details for node AT5G55580
Type: Protein GRN ID: np41970 Name:
Annotation: Mitochondrial transcription termination factor family protein
Gene Locus: AT5G55580
Gene Expression (Affy ATH1 probeset): 248065_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1
3 AT5G55580  --  has similar expression pattern (mutual information value=0.917911) with  --  AT3G27180
4 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1
5 AT5G55580  --  has similar expression pattern (mutual information value=0.886006) with  --  BSM
6 AT5G55580  --  has similar expression pattern (mutual information value=0.878902) with  --  AT4G13220
7 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  AT3G53690
8 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  SKL2
9 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  AT5G53140
10 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  AT1G08800
11 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  AT2G22100
12 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  ATSIZ1
13 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  EMB3101
14 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  interacts with  --  ARC6
15 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.06799) with  --  AT2G30695
16 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.28065) with  --  CLPP6; NCLPP1; NCLPP6
17 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.31766) with  --  ATYLMG1-1; emb1990; YLMG1-1
18 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.21467) with  --  AT3G08740
19 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.29859) with  --  AT3G12930
20 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.23328) with  --  AT3G20230
21 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.02679) with  --  AtTic22-IV; Tic22-IV
22 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.18116) with  --  SAMC1; SAMT1
23 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.27491) with  --  AT3G51140
24 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.01535) with  --  CP29
25 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.19088) with  --  ATDEF2; DEF2; PDF1B
26 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.17545) with  --  EMB3143
27 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.35811) with  --  AT5G59500
28 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  has similar expression pattern (mutual information value=1.27414) with  --  AT4G36390
29 AT5G55580  --  has similar expression pattern (mutual information value=0.834587) with  --  CJD1  --  is modified by  --  STN8
30 AT5G55580  --  has similar expression pattern (mutual information value=0.917911) with  --  AT3G27180  --  has similar expression pattern (mutual information value=0.860774) with  --  AT1G08940
31 AT5G55580  --  has similar expression pattern (mutual information value=0.917911) with  --  AT3G27180  --  has similar expression pattern (mutual information value=0.871746) with  --  PTAC/ATUHY1/ATWHY1
32 AT5G55580  --  has similar expression pattern (mutual information value=0.917911) with  --  AT3G27180  --  has similar expression pattern (mutual information value=0.904934) with  --  AT3G13180
33 AT5G55580  --  has similar expression pattern (mutual information value=0.917911) with  --  AT3G27180  --  has similar expression pattern (mutual information value=0.851379) with  --  AT5G11450
34 AT5G55580  --  has similar expression pattern (mutual information value=0.917911) with  --  AT3G27180  --  has similar expression pattern (mutual information value=0.886163) with  --  AT5G42765
35 AT5G55580  --  has similar expression pattern (mutual information value=0.917911) with  --  AT3G27180  --  has similar expression pattern (mutual information value=0.827494) with  --  AT5G17560
36 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT1G11430
37 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT1G06790
38 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT3G15000
39 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT1G72530
40 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT2G35240
41 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT5G44780
42 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT3G06790
43 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AT4G20020
44 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  HEMG1; PPO1; PPOX
45 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  MEF21
46 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  MEF9
47 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  MEF1
48 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  interacts with  --  AHK2
49 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  has similar expression pattern (mutual information value=0.844075) with  --  AtTic20-II; Tic20-II
50 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  has similar expression pattern (mutual information value=1.03462) with  --  AT1G02150
51 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  has similar expression pattern (mutual information value=0.844723) with  --  AT4G26670
52 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  has similar expression pattern (mutual information value=1.08215) with  --  AtcpRRF; cpRRF; HFP108; RRF
53 AT5G55580  --  has similar expression pattern (mutual information value=0.878499) with  --  DAL; DAL1  --  has similar expression pattern (mutual information value=0.833612) with  --  ATFH5; Fh5
54 AT5G55580  --  has similar expression pattern (mutual information value=0.886006) with  --  BSM  --  has similar expression pattern (mutual information value=0.972058) with  --  AT1G70200
55 AT5G55580  --  has similar expression pattern (mutual information value=0.886006) with  --  BSM  --  has similar expression pattern (mutual information value=1.04945) with  --  AT4G26370
56 AT5G55580  --  has similar expression pattern (mutual information value=0.886006) with  --  BSM  --  has similar expression pattern (mutual information value=1.1353) with  --  AT5G46580
57 AT5G55580  --  has similar expression pattern (mutual information value=0.886006) with  --  BSM  --  has similar expression pattern (mutual information value=1.15377) with  --  SVR7
58 AT5G55580  --  has similar expression pattern (mutual information value=0.878902) with  --  AT4G13220  --  interacts with  --  AtGPAT8; GPAT8
59 AT5G55580  --  has similar expression pattern (mutual information value=0.878902) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.814252) with  --  AT1G53180
60 AT5G55580  --  has similar expression pattern (mutual information value=0.878902) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.921467) with  --  ABCI12
61 AT5G55580  --  has similar expression pattern (mutual information value=0.878902) with  --  AT4G13220  --  has similar expression pattern (mutual information value=0.880012) with  --  AT1G45230
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