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Location:  Home > Details for node ARF16
Type: Protein GRN ID: np02076 Name: ARF16
Annotation: ARF16 | auxin response factor 16
Gene Locus: AT4G30080
Transcription factor /
transcriptional regulator:		 transcription factor family ARF
References:
  • Wang JW, Wang LJ, Mao YB, Cai WJ, Xue HW, Chen XY. Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis. Plant Cell. 2005 Aug;17(8):2204-16. Epub 2005 Jul 8. PubMed PMID: 16006581; PubMed Central PMCID: PMC1182483.
 
Pathways: Auxins 
Gene Expression (Affy ATH1 probeset): 253662_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ARF16  --  interacts with  --  AT5G38420
3 ARF16  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5
4 ARF16  --  interacts with  --  IAA26; PAP1
5 ARF16  --  interacts with  --  IAA32; MEE10
6 ARF16  --  interacts with  --  IAA33
7 ARF16  --  interacts with  --  PSAD-1
8 ARF16  --  interacts with  --  AT2G30880
9 ARF16  --  interacts with  --  IAA31
10 ARF16  --  regulates the expression of   --  ATPIN1
11 ARF16  --  is regulated by  --  IAA8
12 ARF16  --  is the target gene of  --  ath-miR160c
13 ARF16  --  is the target gene of  --  ath-miR160b
14 ARF16  --  is the target gene of  --  ath-miR160a
15 ARF16  --  is a member of  --  ARF1 family35, transcription factor gene
16 ARF16  --  interacts with  --  AT5G38420  --  has product (in catalytic reaction)  --  D-Ribulose 1,5-bisphosphate
17 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT1G09660
18 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  BOP2
19 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT3G14120
20 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  ACD31.2; ACD32.1
21 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT3G27960
22 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  LSU2
23 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  JAI3
24 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  BP; BP1; KNAT1
25 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT1G01440
26 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT4G17680
27 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G32440
28 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  PDF2
29 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G28050
30 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  SEC
31 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  LSU1
32 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AtTCP11; TCP11
33 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  BLH1; EDA29
34 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  ATHDG11; EDT1; HDG11
35 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AtTCP15; TCP15
36 ARF16  --  interacts with  --  AT5G38420  --  interacts with  --  AT5G11980
37 ARF16  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02909) with  --  DRT112; PETE2
38 ARF16  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02964) with  --  AT5G28450
39 ARF16  --  interacts with  --  AT5G38420  --  has similar expression pattern (mutual information value=1.02964) with  --  LHCA2
40 ARF16  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5  --  interacts with  --  IAA30
41 ARF16  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5  --  interacts with  --  IAA13
42 ARF16  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5  --  interacts with  --  ARF10
43 ARF16  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5  --  interacts with  --  IAA29
44 ARF16  --  interacts with  --  ATAUX2-27; AUX2-27; IAA5  --  is modified by  --  MPK16
45 ARF16  --  interacts with  --  IAA32; MEE10  --  interacts with  --  ARF18
46 ARF16  --  interacts with  --  IAA32; MEE10  --  interacts with  --  ARF1
47 ARF16  --  interacts with  --  IAA32; MEE10  --  interacts with  --  ARF2/ARF1-BP
48 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  AT4G29930
49 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  ATEXO70E2; EXO70E2
50 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  AT5G37670
51 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  BOI; RING
52 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  AT1G01260
53 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  AtMYB70; MYB70
54 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  FMA
55 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  HD-GL2-1; HDG1
56 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  AT1G15670
57 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  PGR5-LIKE A
58 ARF16  --  interacts with  --  PSAD-1  --  interacts with  --  PGRL1B
59 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.48948) with  --  AT2G42220
60 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=0.883064) with  --  AT2G29290
61 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.52134) with  --  PSAD-2
62 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.77072) with  --  OE23; OEE2; PSBP-1; PSII-P
63 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.28809) with  --  PSAF
64 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.12508) with  --  NDH-O
65 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.50695) with  --  PETE1
66 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.15389) with  --  ATCDSP32; CDSP32
67 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.30648) with  --  NDF6
68 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.39167) with  --  AT1G21500
69 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.06171) with  --  AT1G74470
70 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.54545) with  --  LHCB4.2
71 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.14461) with  --  MFP1
72 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.21075) with  --  LHCB2; LHCB2.3; LHCB2.4
73 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.06436) with  --  CHUP1
74 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.37959) with  --  PSAK
75 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.30797) with  --  AB165; CAB2; LHCB1.1
76 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.30797) with  --  AB180; CAB3; LHCB1.2
77 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.30797) with  --  AB140; CAB1; CAB140; LHCB1.3
78 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.35293) with  --  PETC; PGR1
79 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.3305) with  --  ATPC1
80 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.37565) with  --  PSBQ; PSBQ-2; PSII-Q
81 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=0.804353) with  --  AT4G19530
82 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.38527) with  --  PSBQ; PSBQ-1; PSBQA
83 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.5195) with  --  PSAE-1
84 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.25973) with  --  SHM1; SHMT1; STM
85 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.31415) with  --  PTAC16
86 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.52686) with  --  CAB4; LHCA4
87 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.03994) with  --  ACA1; ATACA1; CAH1
88 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.26498) with  --  CSP41A
89 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.44688) with  --  LHCB4.1
90 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.42404) with  --  MSP-1; OE33; OEE1; OEE33; PSBO-1; PSBO1
91 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.22503) with  --  FD-GOGAT; GLS1; GLU1; GLUS
92 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.23326) with  --  CAO; CPSRP43
93 ARF16  --  interacts with  --  PSAD-1  --  has similar expression pattern (mutual information value=1.29932) with  --  RCA
94 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  PRA1.F3; PRA8
95 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  PRA1.B2
96 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  AT3G01435
97 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  AT4G25660
98 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  PRA1.B5
99 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  TIFY8
100 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  AT4G25680
101 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  AT3G54120
102 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  AT4G00980
103 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  AT2G19650
104 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  PRA1.F2; PRA7
105 ARF16  --  interacts with  --  AT2G30880  --  interacts with  --  HAB1
106 ARF16  --  interacts with  --  IAA31  --  interacts with  --  ARF12
107 ARF16  --  regulates the expression of   --  ATPIN1  --  is regulated by  --  ARR12
108 ARF16  --  regulates the expression of   --  ATPIN1  --  is regulated by  --  ARR2
109 ARF16  --  regulates the expression of   --  ATPIN1  --  is regulated by  --  ARF5
110 ARF16  --  regulates the expression of   --  ATPIN1  --  is regulated by  --  ARF7
111 ARF16  --  regulates the expression of   --  ATPIN1  --  is regulated by  --  ARF11
112 ARF16  --  regulates the expression of   --  ATPIN1  --  is regulated by  --  ARF17
113 ARF16  --  regulates the expression of   --  ATPIN1  --  is modified by  --  D6PK
114 ARF16  --  regulates the expression of   --  ATPIN1  --  is modified by  --  ABR; PID
115 ARF16  --  regulates the expression of   --  ATPIN1  --  is the target gene of  --  ath-miR5020a
116 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  SRF8
117 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  ALX8; ATSAL1; FRY1; HOS2; RON1; SAL1
118 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  RCN1 ATB BETA BETA
119 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  AtFYPP1; FYPP1
120 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  ADL1; ADL1A; AG68; DL1; DRP1A; RSW9
121 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  Phytochrome B (PhyB)
122 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  clathrin family, coding gene
123 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  RIC4
124 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  ARAC4; ATRAC4; ATROP2; ROP2
125 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  RIC1
126 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  ARAC3; ATROP6; RAC3; RHO1PS; ROP6
127 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  AT3G13410
128 ARF16  --  regulates the expression of   --  ATPIN1  --  interacts with  --  TOPP4
129 ARF16  --  regulates the expression of   --  ATPIN1  --  is a member of  --  ATPIN1 family27, coding gene
130 ARF16  --  is regulated by  --  IAA8  --  regulates the expression of   --  ARF1; ATARF; ATARF1; ATARFA1A
131 ARF16  --  is regulated by  --  IAA8  --  regulates the expression of   --  AtTPR2; TPR2
132 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA15
133 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA19
134 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA28
135 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA34
136 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA9
137 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  BDL
138 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF9
139 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  AXR3
140 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA18
141 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF22
142 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF20
143 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF15
144 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF14
145 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF8
146 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF6
147 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ARF4
148 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA11
149 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA10
150 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA14
151 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA16
152 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA20
153 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA27; PAP2
154 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  AXR2
155 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  ATAUX2-11; IAA4
156 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA3
157 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  IAA2
158 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  AXR5
159 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  AFB2
160 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  AFB5
161 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  AFB1
162 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  TIR1
163 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  AtHB32; HB32; ZHD14
164 ARF16  --  is regulated by  --  IAA8  --  interacts with  --  TPR2
165 ARF16  --  is a member of  --  ARF1 family35, transcription factor gene  --  regulates the expression of   --  BES1
166 ARF16  --  is a member of  --  ARF1 family35, transcription factor gene  --  is regulated by  --  IAA3 family34, transcription factor interactor and regulator gene
167 ARF16  --  is a member of  --  ARF1 family35, transcription factor gene  --  has family member  --  ARF3
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