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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G08490
Type: Protein GRN ID: np26205 Name:
Annotation: BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT3G08490
Gene Expression (Affy ATH1 probeset): 256154_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G08490  --  has similar expression pattern (mutual information value=0.843178) with  --  AT3G45720
3 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220
4 AT3G08490  --  has similar expression pattern (mutual information value=0.843178) with  --  AT3G45720  --  has similar expression pattern (mutual information value=0.802308) with  --  AT5G35300
5 AT3G08490  --  has similar expression pattern (mutual information value=0.843178) with  --  AT3G45720  --  transport  --  Glycerol
6 AT3G08490  --  has similar expression pattern (mutual information value=0.843178) with  --  AT3G45720  --  transport  --  Urea
7 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.8321) with  --  LBD10
8 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.05373) with  --  AT2G22950
9 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.946777) with  --  AT2G02515
10 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.13529) with  --  AT2G18820
11 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.866075) with  --  AT2G18970
12 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.15609) with  --  AT2G07070
13 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.843026) with  --  AT2G29370
14 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.82799) with  --  AT2G27520
15 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.805574) with  --  ATCKX2
16 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.964992) with  --  AT2G18590
17 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.02967) with  --  AT2G25565
18 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.15169) with  --  AT2G10740
19 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.856398) with  --  AT2G15720
20 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.828156) with  --  LLG2
21 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.887) with  --  AT2G16690
22 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.00686) with  --  GLOX1
23 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.932504) with  --  AT2G17910
24 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.82051) with  --  AT1G62210
25 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.996992) with  --  PRA1.G1
26 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.842655) with  --  AT2G04560
27 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.908592) with  --  AT2G20460
28 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.15795) with  --  AT1G36150
29 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.917855) with  --  AT2G16000
30 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.800821) with  --  ARF12
31 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.836134) with  --  ATSTP9; STP9
32 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.19644) with  --  AT1G35617
33 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.800678) with  --  AT1G15600
34 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.825128) with  --  AtMYB117; LOF1; MYB117
35 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.0458) with  --  AT1G34440
36 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.97543) with  --  AT1G48095
37 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.967218) with  --  AtMYB113; MYB113
38 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.834679) with  --  AT1G72131
39 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.838754) with  --  MAP3KE1; MAPKKK7
40 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.838754) with  --  MAP3KE2; MAPKKK6
41 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.904037) with  --  AT3G04170
42 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.04291) with  --  AT3G27590
43 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.886156) with  --  AT3G25260
44 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.08523) with  --  AT3G25720
45 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.06811) with  --  AT3G26614
46 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.09692) with  --  AT2G35080
47 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.976438) with  --  AT3G21410
48 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.00459) with  --  AT3G30280
49 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.07921) with  --  AT1G42650
50 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.807548) with  --  AT1G35880
51 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.866843) with  --  AT5G28600
52 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.10871) with  --  AT2G33260
53 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.828213) with  --  AT4G04000
54 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.973379) with  --  AT4G03950
55 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.88761) with  --  AT4G04690
56 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.806111) with  --  AT4G08370
57 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.802413) with  --  AT4G26730
58 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.802413) with  --  AT2G16030
59 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.12198) with  --  sks10
60 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.133) with  --  AT3G42770
61 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.83675) with  --  AT3G43900
62 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.09746) with  --  AT3G49480
63 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.905274) with  --  TMT3
64 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.889086) with  --  AGP23; ATAGP23
65 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.845315) with  --  AT3G58890
66 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.961258) with  --  ATATG18E; ATG18E; G18E
67 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.827807) with  --  AT5G08090
68 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.08279) with  --  AT5G10420
69 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.84318) with  --  AT5G40050
70 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.22798) with  --  AT5G43800
71 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.08602) with  --  AtRLP55; RLP55
72 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.880245) with  --  AT5G47130
73 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.822995) with  --  AT5G48210
74 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.936765) with  --  AT5G54350
75 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.83149) with  --  AT5G55650
76 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.06297) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80
77 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.00917) with  --  AT5G57720
78 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.829016) with  --  ABCG28
79 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.90846) with  --  ASD2; ATASD2
80 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.962861) with  --  AT5G27510
81 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.854119) with  --  AT5G20760
82 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.07944) with  --  AT5G19810
83 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.848298) with  --  AT1G56675
84 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.848298) with  --  AT4G09146
85 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.07979) with  --  ATPUP3; PUP3
86 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=1.00217) with  --  AT4G17580
87 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.926669) with  --  AT4G15750
88 AT3G08490  --  has similar expression pattern (mutual information value=1.0945) with  --  AT5G54220  --  has similar expression pattern (mutual information value=0.927888) with  --  AT4G14815
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