Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G15630
Type: Protein GRN ID: np20349 Name:
Annotation: Pentatricopeptide repeat (PPR) superfamily protein
Gene Locus: AT2G15630
Gene Expression (Affy ATH1 probeset): 257395_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G15630  --  is the target gene of  --  ath-miR396b
3 AT2G15630  --  is the target gene of  --  ath-miR396a
4 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT5G58980
5 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  BIO1
6 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT5G53220
7 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT5G43060
8 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  ACI1
9 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT4G12050
10 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT3G19400
11 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  FLU
12 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT2G34530
13 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT1G80060
14 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AT1G35370
15 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AtGRF2; GRF2
16 AT2G15630  --  is the target gene of  --  ath-miR396b  --  inhibit the expression of  --  AtGRF3; GRF3
17 AT2G15630  --  is the target gene of  --  ath-miR396a  --  inhibit the expression of  --  AtGRF4; GRF4
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact