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Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G42120
Type: non-coding-other GRN ID: nn02785 Name:
Annotation: transposable element gene
Gene Locus: AT3G42120
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G42120  --  has similar expression pattern (mutual information value=0.901789) with  --  AT2G16830
3 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780
4 AT3G42120  --  has similar expression pattern (mutual information value=0.901789) with  --  AT2G16830  --  has similar expression pattern (mutual information value=0.831893) with  --  AT1G61410
5 AT3G42120  --  has similar expression pattern (mutual information value=0.901789) with  --  AT2G16830  --  has similar expression pattern (mutual information value=0.830249) with  --  AT3G14510
6 AT3G42120  --  has similar expression pattern (mutual information value=0.901789) with  --  AT2G16830  --  has similar expression pattern (mutual information value=0.818668) with  --  AT3G32917
7 AT3G42120  --  has similar expression pattern (mutual information value=0.901789) with  --  AT2G16830  --  has similar expression pattern (mutual information value=0.938946) with  --  AT4G05300
8 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.850128) with  --  AT2G06490
9 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.879312) with  --  AT2G10920
10 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.05182) with  --  AT1G11690
11 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.06276) with  --  AT1G64560
12 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.884663) with  --  SDE3
13 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.839317) with  --  AT1G02490
14 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.17888) with  --  AT1G02710
15 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.09107) with  --  AT1G15840
16 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.963579) with  --  AT1G15830
17 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.805263) with  --  AT3G12190
18 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.818992) with  --  AT4G07530
19 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.0698) with  --  AT3G50540
20 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.22875) with  --  ATGRP-7; ATGRP17; GRP17
21 AT3G42120  --  has similar expression pattern (mutual information value=0.95096) with  --  AT2G10780  --  is the target gene of  --  ath-miR774a
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