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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G64560
Type: non-coding-other GRN ID: nn00391 Name:
Annotation: pseudogene of S-adenosylmethionine-dependent methyltransferase/rRNA (adenine-N6,N6-)-dimethyltransferase/rRNA methyltransferase
Gene Locus: AT1G64560
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01034
3 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT5G30102
4 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G07660
5 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT3G42996
6 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT4G03840
7 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT3G30413
8 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01026
9 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT3G29615
10 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G12930
11 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT5G29075
12 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780
13 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT4G16910
14 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G06470
15 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01024
16 AT1G64560  --  has similar expression pattern (mutual information value=1.1734) with  --  AT2G04870
17 AT1G64560  --  has similar expression pattern (mutual information value=0.835498) with  --  AT1G35740
18 AT1G64560  --  has similar expression pattern (mutual information value=0.901012) with  --  AT4G07530
19 AT1G64560  --  has similar expression pattern (mutual information value=0.838437) with  --  AT5G04650
20 AT1G64560  --  has similar expression pattern (mutual information value=1.03574) with  --  ATGRP-7; ATGRP17; GRP17
21 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01034  --  has similar expression pattern (mutual information value=1.07087) with  --  AT1G61410
22 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01034  --  has similar expression pattern (mutual information value=0.879312) with  --  AT2G10920
23 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01034  --  has similar expression pattern (mutual information value=1.17888) with  --  AT1G02710
24 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01034  --  has similar expression pattern (mutual information value=1.09107) with  --  AT1G15840
25 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01034  --  has similar expression pattern (mutual information value=1.02773) with  --  AT3G32917
26 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G01034  --  is the target gene of  --  ath-miR774a
27 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.820719) with  --  AT2G16830
28 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.850128) with  --  AT2G06490
29 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.05182) with  --  AT1G11690
30 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.884663) with  --  SDE3
31 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.839317) with  --  AT1G02490
32 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.963579) with  --  AT1G15830
33 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.951479) with  --  AT3G14510
34 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.805263) with  --  AT3G12190
35 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.849755) with  --  AT4G05300
36 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=0.95096) with  --  AT3G42120
37 AT1G64560  --  has similar expression pattern (mutual information value=1.06276) with  --  AT2G10780  --  has similar expression pattern (mutual information value=1.0698) with  --  AT3G50540
38 AT1G64560  --  has similar expression pattern (mutual information value=1.1734) with  --  AT2G04870  --  has similar expression pattern (mutual information value=0.83613) with  --  AT2G05580
39 AT1G64560  --  has similar expression pattern (mutual information value=1.03574) with  --  ATGRP-7; ATGRP17; GRP17  --  has similar expression pattern (mutual information value=1.09952) with  --  AT1G41770
40 AT1G64560  --  has similar expression pattern (mutual information value=1.03574) with  --  ATGRP-7; ATGRP17; GRP17  --  interacts with  --  CERK1; LYSM RLK1
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