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Location:  Home > Details for node Spermidine
Type: Compound GRN ID: nc50315 Name: Spermidine
Annotation: Spermidine; N-(3-Aminopropyl)-1,4-butane-diamine
KEGG Acc.: C00315
CHEBI ID:
Formula: C7H19N3
M.W.: 145.2459
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Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 Spermidine  --  has product (in catalytic reaction)  --  3-Acetamidopropanal
3 Spermidine  --  has product (in catalytic reaction)  --  Putrescine
4 Spermidine  --  has product (in catalytic reaction)  --  3-Aminopropanal
5 Spermidine  --  has product (in catalytic reaction)  --  4-Aminobutyraldehyde
6 Spermidine  --  has product (in catalytic reaction)  --  1,3-Diaminopropane
7 Spermidine  --  is product (in catalytic reaction) of  --  ATSPDS3; SPDS3; SPMS
8 Spermidine  --  is product (in catalytic reaction) of  --  S-Adenosylmethioninamine
9 Spermidine  --  is product (in catalytic reaction) of  --  ACL5
10 Spermidine  --  is product (in catalytic reaction) of  --  SPDS2
11 Spermidine  --  is product (in catalytic reaction) of  --  SPDS1
12 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO3; PAO3
13 Spermidine  --  is product (in catalytic reaction) of  --  N1-Acetylspermidine
14 Spermidine  --  is product (in catalytic reaction) of  --  N1-Acetylspermine
15 Spermidine  --  is product (in catalytic reaction) of  --  Spermine
16 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO2; PAO2
17 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO4; PAO4
18 Spermidine  --  is product (in catalytic reaction) of  --  APAO; ATPAO1; PAO1
19 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO5; PAO5
20 Spermidine  --  is transported by  --  AtSDF2; ATSDL; SDF2
21 Spermidine  --  is transported by  --  ABX45; AS11; ATDGAT; DGAT1; RDS1; TAG1
22 Spermidine  --  is transported by  --  AT2G18193
23 Spermidine  --  is transported by  --  AT1G80400
24 Spermidine  --  is transported by  --  CDPK1A/CPK30
25 Spermidine  --  is transported by  --  AT1G51350
26 Spermidine  --  is transported by  --  AT1G09440
27 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  has product (in catalytic reaction)  --  MTA
28 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  has product (in catalytic reaction)  --  MTA
29 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  is product (in catalytic reaction) of  --  ATNLP1; CPA; NLP1
30 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  is product (in catalytic reaction) of  --  N-Carbamoylputrescine
31 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  is transported by  --  NAD4
32 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  is transported by  --  NAD1; NAD1C
33 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  is transported by  --  NAD5; NAD5.1; NAD5A
34 Spermidine  --  has product (in catalytic reaction)  --  Putrescine  --  is transported by  --  NAD7
35 Spermidine  --  is product (in catalytic reaction) of  --  ATSPDS3; SPDS3; SPMS  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
36 Spermidine  --  is product (in catalytic reaction) of  --  S-Adenosylmethioninamine  --  is product (in catalytic reaction) of  --  BUD2; SAMDC4
37 Spermidine  --  is product (in catalytic reaction) of  --  S-Adenosylmethioninamine  --  is product (in catalytic reaction) of  --  AT5G15950
38 Spermidine  --  is product (in catalytic reaction) of  --  S-Adenosylmethioninamine  --  is product (in catalytic reaction) of  --  AT3G25570
39 Spermidine  --  is product (in catalytic reaction) of  --  S-Adenosylmethioninamine  --  is product (in catalytic reaction) of  --  SAMDC
40 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO3; PAO3  --  interacts with  --  HAI1
41 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO3; PAO3  --  interacts with  --  AT3G48510
42 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO3; PAO3  --  interacts with  --  AT1G10585
43 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO3; PAO3  --  interacts with  --  AT5G19920
44 Spermidine  --  is product (in catalytic reaction) of  --  ATPAO2; PAO2  --  interacts with  --  AHL29; SOB3
45 Spermidine  --  is product (in catalytic reaction) of  --  APAO; ATPAO1; PAO1  --  interacts with  --  ATNYE1; NYE1
46 Spermidine  --  is transported by  --  AtSDF2; ATSDL; SDF2  --  transport  --  Mannopine
47 Spermidine  --  is transported by  --  AtSDF2; ATSDL; SDF2  --  transport  --  Polyamine
48 Spermidine  --  is transported by  --  AtSDF2; ATSDL; SDF2  --  transport  --  2-Aminoethylphosphonate
49 Spermidine  --  is transported by  --  AtSDF2; ATSDL; SDF2  --  transport  --  4-Aminobutanoate
50 Spermidine  --  is transported by  --  ABX45; AS11; ATDGAT; DGAT1; RDS1; TAG1  --  has product (in catalytic reaction)  --  Retinyl ester
51 Spermidine  --  is transported by  --  ABX45; AS11; ATDGAT; DGAT1; RDS1; TAG1  --  has product (in catalytic reaction)  --  Long-chain ester
52 Spermidine  --  is transported by  --  ABX45; AS11; ATDGAT; DGAT1; RDS1; TAG1  --  has product (in catalytic reaction)  --  Triacylglycerol
53 Spermidine  --  is transported by  --  AT1G80400  --  transport  --  Thiamine
54 Spermidine  --  is transported by  --  AT1G80400  --  transport  --  Choline
55 Spermidine  --  is transported by  --  CDPK1A/CPK30  --  interacts with  --  AT2G42390
56 Spermidine  --  is transported by  --  CDPK1A/CPK30  --  interacts with  --  ABF4/AREB2
57 Spermidine  --  is transported by  --  CDPK1A/CPK30  --  has similar expression pattern (mutual information value=0.823108) with  --  PTAC/ATUHY1/ATWHY1
58 Spermidine  --  is transported by  --  CDPK1A/CPK30  --  has similar expression pattern (mutual information value=0.837927) with  --  AT1G06840
59 Spermidine  --  is transported by  --  CDPK1A/CPK30  --  has similar expression pattern (mutual information value=0.800455) with  --  AT5G46580
60 Spermidine  --  is transported by  --  CDPK1A/CPK30  --  has similar expression pattern (mutual information value=0.81425) with  --  AT5G59500
61 Spermidine  --  is transported by  --  CDPK1A/CPK30  --  has similar expression pattern (mutual information value=0.830633) with  --  AT4G14350
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