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Location:  Home > Details for node AT1G54520
Type: Protein GRN ID: np13475 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Gene Locus: AT1G54520
Gene Expression (Affy ATH1 probeset): 262955_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G54520  --  is modified by  --  STN8
3 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820
4 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV
5 AT1G54520  --  has similar expression pattern (mutual information value=0.825706) with  --  AT4G26530
6 AT1G54520  --  has similar expression pattern (mutual information value=0.900291) with  --  AT5G14970
7 AT1G54520  --  is modified by  --  STN8  --  has similar expression pattern (mutual information value=1.06341) with  --  APG2; PGA2; TATC; UNE3
8 AT1G54520  --  is modified by  --  STN8  --  has similar expression pattern (mutual information value=0.97026) with  --  AT1G35420
9 AT1G54520  --  is modified by  --  STN8  --  has similar expression pattern (mutual information value=0.953208) with  --  G6PD1
10 AT1G54520  --  is modified by  --  STN8  --  modify  --  CaS
11 AT1G54520  --  is modified by  --  STN8  --  modify  --  PSBH
12 AT1G54520  --  is modified by  --  STN8  --  modify  --  CJD1
13 AT1G54520  --  is modified by  --  STN8  --  modify  --  PGR5-LIKE A
14 AT1G54520  --  is modified by  --  STN8  --  modify  --  PDE334
15 AT1G54520  --  is modified by  --  STN8  --  modify  --  LHCB4.2
16 AT1G54520  --  is modified by  --  STN8  --  modify  --  RBCL
17 AT1G54520  --  is modified by  --  STN8  --  modify  --  PSBC
18 AT1G54520  --  is modified by  --  STN8  --  modify  --  PSBD
19 AT1G54520  --  is modified by  --  STN8  --  modify  --  PSBA
20 AT1G54520  --  is modified by  --  STN8  --  modify  --  AB165; CAB2; LHCB1.1
21 AT1G54520  --  is modified by  --  STN8  --  modify  --  LHCB2; LHCB2.1
22 AT1G54520  --  is modified by  --  STN8  --  modify  --  AT3G47070
23 AT1G54520  --  is modified by  --  STN8  --  modify  --  PSAP; PSI-P; PTAC8; TMP14
24 AT1G54520  --  is modified by  --  STN8  --  modify  --  ALB3
25 AT1G54520  --  is modified by  --  STN8  --  modify  --  PSBL
26 AT1G54520  --  is modified by  --  STN8  --  modify  --  AT4G01150
27 AT1G54520  --  is modified by  --  STN8  --  modify  --  AB180; CAB3; LHCB1.2
28 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=1.00836) with  --  AT1G65230
29 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.836237) with  --  AOC2
30 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.836237) with  --  AOC1
31 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.83176) with  --  AT4G02420
32 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.803378) with  --  AKT2
33 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.819829) with  --  AT5G01015
34 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=0.921921) with  --  RGF9
35 AT1G54520  --  has similar expression pattern (mutual information value=0.840684) with  --  AT1G70820  --  has similar expression pattern (mutual information value=1.10962) with  --  AT5G35170
36 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=1.10639) with  --  FTSH2; VAR2
37 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=0.958553) with  --  AGL3; SEP4
38 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=1.11946) with  --  PQL1; PQL2
39 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=0.891651) with  --  COR413-TM1; COR413IM1; COR414-TM1
40 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=1.23862) with  --  PIFI
41 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=0.973262) with  --  AT1G51805
42 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=0.868264) with  --  NCED4
43 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=1.28553) with  --  AT4G31530
44 AT1G54520  --  has similar expression pattern (mutual information value=0.835197) with  --  ACD1-LIKE; PTC52; TIC55-IV  --  has similar expression pattern (mutual information value=0.866487) with  --  ATCYSA; CYSA; FL3-27
45 AT1G54520  --  has similar expression pattern (mutual information value=0.825706) with  --  AT4G26530  --  interacts with  --  AT1G65000
46 AT1G54520  --  has similar expression pattern (mutual information value=0.825706) with  --  AT4G26530  --  has similar expression pattern (mutual information value=0.881474) with  --  AT4G04330
47 AT1G54520  --  has similar expression pattern (mutual information value=0.825706) with  --  AT4G26530  --  has product (in catalytic reaction)  --  D-Glyceraldehyde 3-phosphate
48 AT1G54520  --  has similar expression pattern (mutual information value=0.825706) with  --  AT4G26530  --  has product (in catalytic reaction)  --  Glycerone phosphate
49 AT1G54520  --  has similar expression pattern (mutual information value=0.900291) with  --  AT5G14970  --  has similar expression pattern (mutual information value=0.820815) with  --  ATGLR3.4; GLR3.4; GLUR3
50 AT1G54520  --  has similar expression pattern (mutual information value=0.900291) with  --  AT5G14970  --  has similar expression pattern (mutual information value=0.927545) with  --  AT1G79790
51 AT1G54520  --  has similar expression pattern (mutual information value=0.900291) with  --  AT5G14970  --  has similar expression pattern (mutual information value=0.906056) with  --  CXC750; ECS1
52 AT1G54520  --  has similar expression pattern (mutual information value=0.900291) with  --  AT5G14970  --  has similar expression pattern (mutual information value=0.9589) with  --  FTRA1
53 AT1G54520  --  has similar expression pattern (mutual information value=0.900291) with  --  AT5G14970  --  interacts with  --  TPR3
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