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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G54970
Type: Protein GRN ID: np38965 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G54970
Gene Expression (Affy ATH1 probeset): 248139_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7
3 AT5G54970  --  has similar expression pattern (mutual information value=0.991054) with  --  HTA6
4 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT1G63480
5 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AGF1
6 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT5G10980
7 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  WLIM1
8 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  SADHU3-2
9 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  GLX2-2; GLY2
10 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  GASA4
11 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT-RSH2; ATRSH2; RSH2
12 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT4G17800
13 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT5G58990
14 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT5G39580
15 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AHL20
16 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT5G61890
17 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AT3G05560
18 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  MEE35; TCP4
19 AT5G54970  --  interacts with  --  AHL27; ESC; ORE7  --  interacts with  --  AHL29; SOB3
20 AT5G54970  --  has similar expression pattern (mutual information value=0.991054) with  --  HTA6  --  has similar expression pattern (mutual information value=1.28797) with  --  AT1G09200
21 AT5G54970  --  has similar expression pattern (mutual information value=0.991054) with  --  HTA6  --  has similar expression pattern (mutual information value=0.848571) with  --  AT4G28310
22 AT5G54970  --  has similar expression pattern (mutual information value=0.991054) with  --  HTA6  --  has similar expression pattern (mutual information value=1.28759) with  --  AT3G54750
23 AT5G54970  --  has similar expression pattern (mutual information value=0.991054) with  --  HTA6  --  has similar expression pattern (mutual information value=0.964798) with  --  AT5G10390
24 AT5G54970  --  has similar expression pattern (mutual information value=0.991054) with  --  HTA6  --  has similar expression pattern (mutual information value=1.01121) with  --  ATRPA70D; RPA70D
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