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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G28310
Type: Protein GRN ID: np31441 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT4G28310
Gene Expression (Affy ATH1 probeset): 253817_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200
3 AT4G28310  --  has similar expression pattern (mutual information value=0.848571) with  --  HTA6
4 AT4G28310  --  has similar expression pattern (mutual information value=0.808054) with  --  AT5G65360
5 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200  --  interacts with  --  LUH; MUM1
6 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200  --  interacts with  --  EDM2
7 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200  --  has similar expression pattern (mutual information value=0.800695) with  --  AT3G02640
8 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200  --  has similar expression pattern (mutual information value=0.858322) with  --  AT4G15830
9 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200  --  is modified by  --  AtAUR1; AUR1
10 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200  --  is modified by  --  AtAUR3; AUR3
11 AT4G28310  --  has similar expression pattern (mutual information value=0.827291) with  --  AT1G09200  --  is modified by  --  AtAUR2; AUR2
12 AT4G28310  --  has similar expression pattern (mutual information value=0.848571) with  --  HTA6  --  has similar expression pattern (mutual information value=1.28759) with  --  AT3G54750
13 AT4G28310  --  has similar expression pattern (mutual information value=0.848571) with  --  HTA6  --  has similar expression pattern (mutual information value=0.991054) with  --  AT5G54970
14 AT4G28310  --  has similar expression pattern (mutual information value=0.848571) with  --  HTA6  --  has similar expression pattern (mutual information value=1.01121) with  --  ATRPA70D; RPA70D
15 AT4G28310  --  has similar expression pattern (mutual information value=0.808054) with  --  AT5G65360  --  has similar expression pattern (mutual information value=0.830445) with  --  MCM7; PRL
16 AT4G28310  --  has similar expression pattern (mutual information value=0.808054) with  --  AT5G65360  --  has similar expression pattern (mutual information value=0.805019) with  --  HMGB6
17 AT4G28310  --  has similar expression pattern (mutual information value=0.808054) with  --  AT5G65360  --  interacts with  --  ATMBD9; MBD9
18 AT4G28310  --  has similar expression pattern (mutual information value=0.808054) with  --  AT5G65360  --  interacts with  --  AtLHP1; LHP1; TFL2
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