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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G54750
Type: Protein GRN ID: np30563 Name:
Annotation: unknown protein; Has 145 Blast hits to 145 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Gene Locus: AT3G54750
Gene Expression (Affy ATH1 probeset): 251852_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G54750  --  has similar expression pattern (mutual information value=0.908318) with  --  ATBARD1; BARD1; ROW1
3 AT3G54750  --  has similar expression pattern (mutual information value=0.827567) with  --  AtHaspin; Haspin
4 AT3G54750  --  has similar expression pattern (mutual information value=0.813589) with  --  AT3G02820
5 AT3G54750  --  has similar expression pattern (mutual information value=1.10474) with  --  DDM2; DMT01; DMT1; MET1; MET2; METI
6 AT3G54750  --  has similar expression pattern (mutual information value=1.28759) with  --  HTA6
7 AT3G54750  --  has similar expression pattern (mutual information value=0.908318) with  --  ATBARD1; BARD1; ROW1  --  interacts with  --  ATBRCA1; BRCA1
8 AT3G54750  --  has similar expression pattern (mutual information value=1.10474) with  --  DDM2; DMT01; DMT1; MET1; MET2; METI  --  has similar expression pattern (mutual information value=0.858046) with  --  PYRR; UPP
9 AT3G54750  --  has similar expression pattern (mutual information value=1.10474) with  --  DDM2; DMT01; DMT1; MET1; MET2; METI  --  has product (in catalytic reaction)  --  DNA 5-methylcytosine
10 AT3G54750  --  has similar expression pattern (mutual information value=1.10474) with  --  DDM2; DMT01; DMT1; MET1; MET2; METI  --  interacts with  --  EMB173; FIS1; MEA; SDG5
11 AT3G54750  --  has similar expression pattern (mutual information value=1.10474) with  --  DDM2; DMT01; DMT1; MET1; MET2; METI  --  interacts with  --  FIE; FIE1; FIS3
12 AT3G54750  --  has similar expression pattern (mutual information value=1.28759) with  --  HTA6  --  has similar expression pattern (mutual information value=1.28797) with  --  AT1G09200
13 AT3G54750  --  has similar expression pattern (mutual information value=1.28759) with  --  HTA6  --  has similar expression pattern (mutual information value=0.848571) with  --  AT4G28310
14 AT3G54750  --  has similar expression pattern (mutual information value=1.28759) with  --  HTA6  --  has similar expression pattern (mutual information value=0.964798) with  --  AT5G10390
15 AT3G54750  --  has similar expression pattern (mutual information value=1.28759) with  --  HTA6  --  has similar expression pattern (mutual information value=0.991054) with  --  AT5G54970
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