Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATCOL5; COL5
Type: Protein GRN ID: np38858 Name: ATCOL5; COL5
Annotation: ATCOL5, COL5 | CONSTANS-like 5
Gene Locus: AT5G57660
Transcription factor /
transcriptional regulator:		 transcription factor family C2C2-CO-like
Gene Expression (Affy ATH1 probeset): 247921_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2
3 ATCOL5; COL5  --  interacts with  --  BBX32; EIP6
4 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B
5 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.831877) with  --  SCPL13
6 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690
7 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1
8 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  APRR5; PRR5
9 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  CDF1
10 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  CDF3
11 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  CDF2
12 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  AT2G33500
13 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  AT2G47890
14 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ATCOL4; COL4
15 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ATCOL3; COL3
16 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ATCOL2; COL2
17 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  CO; FG
18 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ATDI19; DI19
19 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  GI
20 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ADO3; FKF1
21 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ADO1; FKL2; LKP1; ZTL
22 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  AT1G28050
23 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  AT1G68520
24 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ASK20; SK20
25 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ASK14; SK14
26 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ASK5; SK5
27 ATCOL5; COL5  --  interacts with  --  ADO2; LKP2  --  interacts with  --  ASK3; SK3
28 ATCOL5; COL5  --  interacts with  --  BBX32; EIP6  --  interacts with  --  ACBP2
29 ATCOL5; COL5  --  interacts with  --  BBX32; EIP6  --  interacts with  --  EDA33; GT140; IND; IND1
30 ATCOL5; COL5  --  interacts with  --  BBX32; EIP6  --  interacts with  --  EMF1
31 ATCOL5; COL5  --  interacts with  --  BBX32; EIP6  --  interacts with  --  PTF1; TCP13; TFPD
32 ATCOL5; COL5  --  interacts with  --  BBX32; EIP6  --  interacts with  --  AT1G51980
33 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  interacts with  --  LSU1
34 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  interacts with  --  AtTCP11; TCP11
35 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  interacts with  --  AT3G56270
36 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2
37 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  interacts with  --  AT1G68670
38 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  interacts with  --  IMK3; MRLK
39 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  has similar expression pattern (mutual information value=0.80826) with  --  SNRNP-G
40 ATCOL5; COL5  --  interacts with  --  NRPB6B; NRPE6B  --  has similar expression pattern (mutual information value=0.843871) with  --  PFD1
41 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.831877) with  --  SCPL13  --  has similar expression pattern (mutual information value=1.05154) with  --  SCPL8; SNG1
42 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.831877) with  --  SCPL13  --  has similar expression pattern (mutual information value=0.830912) with  --  AT2G15960
43 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.937595) with  --  AT2G05540
44 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.85608) with  --  AT1G07650
45 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.869058) with  --  AT1G29670
46 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.827277) with  --  AT3G07470
47 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.959694) with  --  ATRALF23; RALF23
48 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.951787) with  --  AtGPAT8; GPAT8
49 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.922959) with  --  ATT1; CYP86A2
50 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  has similar expression pattern (mutual information value=0.868303) with  --  AT3G47295
51 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ATRBOH D
52 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ATELP; ATELP1; ATVSR1; BP-80; BP80; BP80-1;1; BP80B; GFS1; VSR1; VSR1;1
53 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  SAG29
54 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  OLE2; OLEO2
55 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AMT1;1; ATAMT1; ATAMT1;1
56 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  MSL3
57 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  PGR5-LIKE A
58 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  PIP1;3; PIP1C; TMP-B
59 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ABCG12; AtABCG12; ATWBC12; CER5; D3; WBC12
60 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ASG6; CRK2
61 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ABCG13
62 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ALMT1; ATALMT1
63 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AtRLP30; RLP30
64 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G72300
65 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  NRT1.9
66 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ATUTR2; UTR2
67 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ATPPT2; PPT2
68 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  SFP1
69 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT3G53810
70 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G40460
71 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ATFKBP42; FKBP42; TWD1; UCU2
72 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT3G52640
73 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT4G22830
74 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT4G02725
75 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G29180
76 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G40640
77 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G11540
78 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G64870
79 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G44960
80 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G24010
81 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G11330
82 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G49760
83 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT4G34220
84 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT3G46370
85 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT3G59740
86 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G10020
87 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G27190
88 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G63930
89 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G10290
90 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  CRK14
91 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  SRF8
92 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G28960
93 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G07560
94 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT4G32600
95 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  DAL2; ZCF61
96 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G15280
97 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ATPUP4; PUP4
98 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT4G21570
99 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G16560
100 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G01230
101 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT4G31340
102 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G01070
103 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G39510
104 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G23093
105 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G38330
106 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G33100
107 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G15150
108 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G49130
109 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ALF5
110 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT3G08930
111 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT3G07540
112 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G25260
113 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G55230
114 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G60410
115 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G01970
116 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT3G50190
117 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G28315
118 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G06890
119 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  CYP86C3
120 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G42390
121 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G47530
122 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G15500
123 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT1G05640
124 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT5G11870
125 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  AT2G25890
126 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  ATNAP5; NAP5
127 ATCOL5; COL5  --  has similar expression pattern (mutual information value=0.93449) with  --  AT4G38690  --  interacts with  --  NDL1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact