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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G13310
Type: Protein GRN ID: np38685 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G13310
Gene Expression (Affy ATH1 probeset): 250290_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G13310  --  interacts with  --  TOPP7
3 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760
4 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP
5 AT5G13310  --  has similar expression pattern (mutual information value=0.80035) with  --  AT1G15230
6 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560
7 AT5G13310  --  has similar expression pattern (mutual information value=0.803357) with  --  AT5G54930
8 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390
9 AT5G13310  --  has similar expression pattern (mutual information value=0.90588) with  --  ATE2FB; E2F1; E2FB
10 AT5G13310  --  interacts with  --  TOPP7  --  interacts with  --  INH3
11 AT5G13310  --  interacts with  --  TOPP7  --  interacts with  --  AT3G53670
12 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.802695) with  --  ASG3
13 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.853085) with  --  ATRPAC43; RPAC43
14 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.940693) with  --  AT1G09320
15 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.844046) with  --  AT1G07615
16 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.843556) with  --  AT1G12830
17 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.834449) with  --  AT3G13350
18 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.805089) with  --  AT3G46920
19 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.99057) with  --  At-RS31; ATRSP31; RS31; RSP31
20 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.911863) with  --  AT3G63400
21 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.835148) with  --  ATCSLA09; ATCSLA9; CSLA09; CSLA9; RAT4
22 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.839141) with  --  AT5G22840
23 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.908548) with  --  AT5G47090
24 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.950384) with  --  MEF1
25 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.837254) with  --  AT5G15570
26 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.815585) with  --  AT5G10710
27 AT5G13310  --  has similar expression pattern (mutual information value=0.869047) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.82337) with  --  AT4G17620
28 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=0.829911) with  --  AT2G02730
29 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=0.91487) with  --  PIP2;6; PIP2E
30 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=0.804935) with  --  AT2G45180
31 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=0.813205) with  --  AT5G60430
32 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=0.813205) with  --  PRORP2
33 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=1.01826) with  --  AT1G09750
34 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=1.17492) with  --  TUB5
35 AT5G13310  --  has similar expression pattern (mutual information value=0.821319) with  --  ELP  --  has similar expression pattern (mutual information value=1.13367) with  --  AT1G55260
36 AT5G13310  --  has similar expression pattern (mutual information value=0.80035) with  --  AT1G15230  --  has similar expression pattern (mutual information value=1.00978) with  --  AT1G23780
37 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.943361) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
38 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.850861) with  --  AT1G68980
39 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.817186) with  --  AT4G01790
40 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.893168) with  --  AT4G17950
41 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.934373) with  --  AT3G48210
42 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.868003) with  --  ABO1; AtELP1; ELO2
43 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.877705) with  --  AT5G63010
44 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.803758) with  --  ATLACS7; LACS7
45 AT5G13310  --  has similar expression pattern (mutual information value=0.865895) with  --  AT1G48560  --  has similar expression pattern (mutual information value=0.922183) with  --  SMU2
46 AT5G13310  --  has similar expression pattern (mutual information value=0.803357) with  --  AT5G54930  --  has similar expression pattern (mutual information value=0.8109) with  --  AT2G45520
47 AT5G13310  --  has similar expression pattern (mutual information value=0.803357) with  --  AT5G54930  --  has similar expression pattern (mutual information value=0.820861) with  --  ENR1; MOD1
48 AT5G13310  --  has similar expression pattern (mutual information value=0.803357) with  --  AT5G54930  --  has similar expression pattern (mutual information value=0.857651) with  --  ATH4; ATTRX4
49 AT5G13310  --  has similar expression pattern (mutual information value=0.803357) with  --  AT5G54930  --  has similar expression pattern (mutual information value=0.821858) with  --  CESA6; E112; IXR2; PRC1
50 AT5G13310  --  has similar expression pattern (mutual information value=0.803357) with  --  AT5G54930  --  has similar expression pattern (mutual information value=0.892865) with  --  AtMAPR4; MAPR4
51 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.811354) with  --  CHR9
52 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.802297) with  --  GTD1; HAC13; HAF01; HAF1; TAF1
53 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.818026) with  --  ATSOT18; ATST5B; SOT18
54 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.803147) with  --  AT3G02860
55 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.867347) with  --  AT1G56290
56 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.809343) with  --  XTH7
57 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.851091) with  --  AT3G62140
58 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.814103) with  --  AT3G62920
59 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.970858) with  --  AT5G08535
60 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.872116) with  --  AT5G13970
61 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.813114) with  --  AT5G51130
62 AT5G13310  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.868688) with  --  AT5G26610
63 AT5G13310  --  has similar expression pattern (mutual information value=0.90588) with  --  ATE2FB; E2F1; E2FB  --  interacts with  --  ATDPB; DPB
64 AT5G13310  --  has similar expression pattern (mutual information value=0.90588) with  --  ATE2FB; E2F1; E2FB  --  interacts with  --  DPA
65 AT5G13310  --  has similar expression pattern (mutual information value=0.90588) with  --  ATE2FB; E2F1; E2FB  --  interacts with  --  CYC2BAT; CYC3B; CYCA2;2
66 AT5G13310  --  has similar expression pattern (mutual information value=0.90588) with  --  ATE2FB; E2F1; E2FB  --  regulates the expression of   --  ATCDC6; CDC6
67 AT5G13310  --  has similar expression pattern (mutual information value=0.90588) with  --  ATE2FB; E2F1; E2FB  --  has similar expression pattern (mutual information value=0.818632) with  --  CRF7
68 AT5G13310  --  has similar expression pattern (mutual information value=0.90588) with  --  ATE2FB; E2F1; E2FB  --  has similar expression pattern (mutual information value=0.800412) with  --  ATGSTU20; GSTU20
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