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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G62140
Type: Protein GRN ID: np25263 Name:
Annotation: CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Gene Locus: AT3G62140
Gene Expression (Affy ATH1 probeset): 251247_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G62140  --  has similar expression pattern (mutual information value=0.870578) with  --  AT5G26610
3 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390
4 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2
5 AT3G62140  --  has similar expression pattern (mutual information value=0.870578) with  --  AT5G26610  --  has similar expression pattern (mutual information value=0.942792) with  --  AT2G30530
6 AT3G62140  --  has similar expression pattern (mutual information value=0.870578) with  --  AT5G26610  --  has similar expression pattern (mutual information value=0.801525) with  --  AT3G21810
7 AT3G62140  --  has similar expression pattern (mutual information value=0.870578) with  --  AT5G26610  --  has similar expression pattern (mutual information value=0.931435) with  --  AT4G27120
8 AT3G62140  --  has similar expression pattern (mutual information value=0.870578) with  --  AT5G26610  --  has similar expression pattern (mutual information value=0.936943) with  --  AT4G32560
9 AT3G62140  --  has similar expression pattern (mutual information value=0.870578) with  --  AT5G26610  --  has similar expression pattern (mutual information value=0.847571) with  --  AME3
10 AT3G62140  --  has similar expression pattern (mutual information value=0.870578) with  --  AT5G26610  --  has similar expression pattern (mutual information value=0.843449) with  --  AtMAPR4; MAPR4
11 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.842713) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
12 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.811354) with  --  CHR9
13 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.947888) with  --  AT1G09320
14 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.802297) with  --  GTD1; HAC13; HAF01; HAF1; TAF1
15 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.81046) with  --  AT1G48560
16 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.835432) with  --  AT1G12830
17 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.818026) with  --  ATSOT18; ATST5B; SOT18
18 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.803147) with  --  AT3G02860
19 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.867347) with  --  AT1G56290
20 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.809343) with  --  XTH7
21 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.814103) with  --  AT3G62920
22 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.970858) with  --  AT5G08535
23 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.83236) with  --  AT5G13310
24 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.872116) with  --  AT5G13970
25 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.813114) with  --  AT5G51130
26 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.838833) with  --  ATE2FB; E2F1; E2FB
27 AT3G62140  --  has similar expression pattern (mutual information value=0.851091) with  --  AT5G09390  --  has similar expression pattern (mutual information value=0.849161) with  --  AT4G17620
28 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  interacts with  --  SMU1
29 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.12552) with  --  ATSCC3; SCC3
30 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.989628) with  --  SMP1
31 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.866645) with  --  AT1G65020
32 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.0802) with  --  MBD10
33 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.810614) with  --  FRS8
34 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.944793) with  --  DRT111
35 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.827216) with  --  AT1G32760
36 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.964342) with  --  AT1G01930
37 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.987286) with  --  GIF2
38 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.803986) with  --  AT1G06210
39 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.92969) with  --  ATQSOX1; QSO2; QSOX1
40 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.838754) with  --  GATA28; TIFY2A; ZML2
41 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.94764) with  --  HUB2
42 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.04558) with  --  AT3G09360
43 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.03325) with  --  AT3G19650
44 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.0333) with  --  AT3G19630
45 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.0058) with  --  AT3G24255
46 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.0058) with  --  AT3G23910
47 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.917583) with  --  AT2G34040
48 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.0421) with  --  AT4G11560
49 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.910083) with  --  AT4G17950
50 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.874716) with  --  AT3G42860
51 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.970927) with  --  SIS3
52 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.811459) with  --  AT5G28330
53 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.811459) with  --  AT5G28390
54 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.811459) with  --  AT3G52660
55 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.20402) with  --  AT3G53390
56 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.955064) with  --  ATFIP37; FIP37
57 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.887464) with  --  AGL18
58 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.828394) with  --  AT3G62080
59 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.01344) with  --  ATO
60 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.832239) with  --  AT5G10950
61 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.850601) with  --  AT5G11350
62 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.879748) with  --  ABO1; AtELP1; ELO2
63 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.955325) with  --  AT5G13560
64 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.19423) with  --  ATGSTT2; GST10B; GSTT2
65 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.19423) with  --  ATGSTT3; GST10C; GSTT3
66 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.07891) with  --  AT5G47090
67 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.988741) with  --  emb1441
68 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.834961) with  --  MEF1
69 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.07708) with  --  AT5G53800
70 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.06662) with  --  AT5G55670
71 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.846714) with  --  CPL4
72 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.830398) with  --  ATPUB49; PUB49
73 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.867234) with  --  AT5G30490
74 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.92712) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
75 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.967569) with  --  AT5G15570
76 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=0.948877) with  --  ELF9
77 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.07201) with  --  AT1G25988
78 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.07201) with  --  AT1G25682
79 AT3G62140  --  has similar expression pattern (mutual information value=0.801081) with  --  SMU2  --  has similar expression pattern (mutual information value=1.13631) with  --  FAR1
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