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Location:  Home > Details for node AT3G13350
Type: Protein GRN ID: np25406 Name:
Annotation: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Gene Locus: AT3G13350
Transcription factor /
transcriptional regulator:		 transcription factor & chromatin remodeling family ARID-HMG
Gene Expression (Affy ATH1 probeset): 257655_at    
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 Protein modification
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 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G13350  --  interacts with  --  AT4G29930
3 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760
4 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790
5 AT3G13350  --  has similar expression pattern (mutual information value=0.820179) with  --  AtHPR1; AtTHO1; HPR1; THO1
6 AT3G13350  --  has similar expression pattern (mutual information value=0.809536) with  --  AT5G25080
7 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  bHLH071
8 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  AT4G32960
9 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  ATWRKY75; WRKY75
10 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  AT5G10710
11 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  AT5G03500
12 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  AT5G57910
13 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  PSAD-1
14 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  AT3G58380
15 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  PSAD-2
16 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  CAO; CPSRP43
17 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  APL; WDY
18 AT3G13350  --  interacts with  --  AT4G29930  --  interacts with  --  AT4G37850
19 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.802695) with  --  ASG3
20 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.853085) with  --  ATRPAC43; RPAC43
21 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.940693) with  --  AT1G09320
22 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.844046) with  --  AT1G07615
23 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.899179) with  --  AT1G48560
24 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.843556) with  --  AT1G12830
25 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.805089) with  --  AT3G46920
26 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.99057) with  --  At-RS31; ATRSP31; RS31; RSP31
27 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.911863) with  --  AT3G63400
28 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.835148) with  --  ATCSLA09; ATCSLA9; CSLA09; CSLA9; RAT4
29 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.869047) with  --  AT5G13310
30 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.839141) with  --  AT5G22840
31 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.908548) with  --  AT5G47090
32 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.950384) with  --  MEF1
33 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.931701) with  --  AT5G54930
34 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.837254) with  --  AT5G15570
35 AT3G13350  --  has similar expression pattern (mutual information value=0.834449) with  --  AT1G03760  --  has similar expression pattern (mutual information value=0.82337) with  --  AT4G17620
36 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.868155) with  --  AT2G45520
37 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.80223) with  --  AT2G04340
38 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.868601) with  --  AT1G49350
39 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.996113) with  --  ATH4; ATTRX4
40 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.806609) with  --  AT1G69380
41 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.856297) with  --  AT1G68980
42 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.804802) with  --  AT3G07590
43 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.815406) with  --  AT3G48210
44 AT3G13350  --  has similar expression pattern (mutual information value=0.86408) with  --  AT4G01790  --  has similar expression pattern (mutual information value=0.801787) with  --  AT5G16060
45 AT3G13350  --  has similar expression pattern (mutual information value=0.820179) with  --  AtHPR1; AtTHO1; HPR1; THO1  --  interacts with  --  ATPDI2; ATPDIL1-4; PDI2; PDIL1-4
46 AT3G13350  --  has similar expression pattern (mutual information value=0.820179) with  --  AtHPR1; AtTHO1; HPR1; THO1  --  has similar expression pattern (mutual information value=0.951105) with  --  ATO
47 AT3G13350  --  has similar expression pattern (mutual information value=0.820179) with  --  AtHPR1; AtTHO1; HPR1; THO1  --  has similar expression pattern (mutual information value=0.829998) with  --  AT5G11350
48 AT3G13350  --  has similar expression pattern (mutual information value=0.809536) with  --  AT5G25080  --  has similar expression pattern (mutual information value=0.910629) with  --  AT2G47790
49 AT3G13350  --  has similar expression pattern (mutual information value=0.809536) with  --  AT5G25080  --  has similar expression pattern (mutual information value=0.815714) with  --  AtGRXS17; GRXS17
50 AT3G13350  --  has similar expression pattern (mutual information value=0.809536) with  --  AT5G25080  --  interacts with  --  AT3G01435
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