Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G20310
Type: Protein GRN ID: np35605 Name:
Annotation: Peptidase M50 family protein
Gene Locus: AT4G20310
Gene Expression (Affy ATH1 probeset): 254517_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260
3 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660
4 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12
5 AT4G20310  --  has similar expression pattern (mutual information value=1.12699) with  --  AT5G34900
6 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.887449) with  --  AT2G22950
7 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.838429) with  --  CESA10
8 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.93866) with  --  AT2G15870
9 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.830302) with  --  BAN
10 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.939225) with  --  AT1G31100
11 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.820214) with  --  AT1G48095
12 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.833536) with  --  AT4G18000
13 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.87618) with  --  AT3G49480
14 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.875929) with  --  AT3G55680
15 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.846018) with  --  AT3G59845
16 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.894945) with  --  AT5G18880
17 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.866854) with  --  AtRLP55; RLP55
18 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.893559) with  --  AT5G25860
19 AT4G20310  --  has similar expression pattern (mutual information value=0.833179) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.900546) with  --  ATPUP3; PUP3
20 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.873802) with  --  AT2G15750
21 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT1G23930
22 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT4G09370
23 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT1G36080
24 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT5G44415
25 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.821548) with  --  AT3G47330
26 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT5G37383
27 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT5G44416
28 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT3G47310
29 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT4G28970
30 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT1G23920
31 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT1G36090
32 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.808111) with  --  AT4G09380
33 AT4G20310  --  has similar expression pattern (mutual information value=0.913473) with  --  AT1G32660  --  has similar expression pattern (mutual information value=0.837677) with  --  CYP724A1
34 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.882389) with  --  ATSUC8; SUC8
35 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903824) with  --  ATPAP19; PAP19
36 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903824) with  --  ATPAP11; PAP11
37 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903824) with  --  ATPAP5; PAP5
38 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.96452) with  --  AT2G35080
39 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.903857) with  --  AT3G24250
40 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.931454) with  --  AT1G20800
41 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.992722) with  --  AT4G29250
42 AT4G20310  --  has similar expression pattern (mutual information value=0.827835) with  --  AtZIP12; ZIP12  --  has similar expression pattern (mutual information value=0.915628) with  --  AT3G46360
43 AT4G20310  --  has similar expression pattern (mutual information value=1.12699) with  --  AT5G34900  --  has similar expression pattern (mutual information value=0.882228) with  --  AT1G61510
44 AT4G20310  --  has similar expression pattern (mutual information value=1.12699) with  --  AT5G34900  --  has similar expression pattern (mutual information value=0.882228) with  --  AT4G22450
45 AT4G20310  --  has similar expression pattern (mutual information value=1.12699) with  --  AT5G34900  --  has similar expression pattern (mutual information value=1.21661) with  --  AT2G14130
46 AT4G20310  --  has similar expression pattern (mutual information value=1.12699) with  --  AT5G34900  --  has similar expression pattern (mutual information value=1.21661) with  --  AT3G47260
47 AT4G20310  --  has similar expression pattern (mutual information value=1.12699) with  --  AT5G34900  --  has similar expression pattern (mutual information value=1.21661) with  --  AT3G30440
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab