Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G55680
Type: Protein GRN ID: np27012 Name:
Annotation: Plant invertase/pectin methylesterase inhibitor superfamily protein
Gene Locus: AT3G55680
Gene Expression (Affy ATH1 probeset): 251748_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870
3 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100
4 AT3G55680  --  has similar expression pattern (mutual information value=0.8765) with  --  AT2G20460
5 AT3G55680  --  has similar expression pattern (mutual information value=0.875929) with  --  AT1G49260
6 AT3G55680  --  has similar expression pattern (mutual information value=0.823065) with  --  AT1G74990
7 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12
8 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.92858) with  --  CYP76C3
9 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=1.02312) with  --  AT2G22950
10 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.944237) with  --  AT2G18590
11 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.909575) with  --  AT2G25565
12 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.92121) with  --  AT2G24310
13 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.811433) with  --  CESA10
14 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.921804) with  --  AT2G05600
15 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.86686) with  --  AT2G15920
16 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.915633) with  --  AT2G16690
17 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.93136) with  --  AT1G24640
18 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.809993) with  --  anac025; NAC025
19 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.803226) with  --  AT1G62210
20 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.857174) with  --  COBL6
21 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=1.09917) with  --  PRA1.G1
22 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.851288) with  --  BAN
23 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.938626) with  --  AT2G13510
24 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=1.00835) with  --  AT1G36150
25 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.856016) with  --  AT1G43630
26 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.824831) with  --  KOM
27 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.80933) with  --  AT1G10980
28 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.868836) with  --  AT3G25260
29 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.82094) with  --  AT1G60400
30 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.830176) with  --  AT1G78840
31 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.811867) with  --  AT3G30250
32 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.813126) with  --  AT3G11060
33 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.821054) with  --  AT1G07060
34 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.934177) with  --  AT5G28590
35 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.805425) with  --  ACHT3
36 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=1.11393) with  --  AT2G33260
37 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.887754) with  --  AT4G03950
38 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.962454) with  --  AT4G05620
39 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.979932) with  --  AT4G17450
40 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.979932) with  --  AT4G19790
41 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.880785) with  --  ATDGK6; DGK6
42 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=1.05444) with  --  AT3G49480
43 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.852331) with  --  TMT3
44 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.864041) with  --  AT3G58890
45 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=1.03983) with  --  AT3G59845
46 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.92693) with  --  ATATG18E; ATG18E; G18E
47 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.811634) with  --  AT5G08090
48 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.869671) with  --  AT5G37170
49 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.826914) with  --  AtSWEET8; SWEET8
50 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.947514) with  --  AtRLP55; RLP55
51 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.89604) with  --  AT5G48210
52 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.923939) with  --  AT5G54350
53 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.95842) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80
54 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.931993) with  --  AT5G62830
55 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.97808) with  --  ATPUP3; PUP3
56 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=1.01411) with  --  AT4G17580
57 AT3G55680  --  has similar expression pattern (mutual information value=1.00136) with  --  AT2G15870  --  has similar expression pattern (mutual information value=0.908543) with  --  AT4G14815
58 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.933895) with  --  AT2G02515
59 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.807014) with  --  AT2G05890
60 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.872225) with  --  AT3G31920
61 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.82817) with  --  AT1G55550
62 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.92877) with  --  AT1G09550
63 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.978594) with  --  PAB3
64 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.944197) with  --  NF-YB7
65 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=1.09135) with  --  AT2G16410
66 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.968169) with  --  AT2G05370
67 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.818448) with  --  RPP27
68 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=1.04416) with  --  AT1G35617
69 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.952754) with  --  AT1G34440
70 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.928462) with  --  AT1G43760
71 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.836946) with  --  AT1G69860
72 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.903158) with  --  AT1G72131
73 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.82693) with  --  AT3G25280
74 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.915362) with  --  AT4G18000
75 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=1.02741) with  --  AT3G42820
76 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=1.13278) with  --  AT3G42770
77 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.950449) with  --  AT5G10420
78 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.94728) with  --  AT5G44850
79 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.816363) with  --  AT5G46140
80 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.870183) with  --  AT5G62800
81 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.995745) with  --  AT5G25860
82 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.90678) with  --  AT5G26640
83 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.845574) with  --  AT5G09370
84 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.915838) with  --  ATINT2; INT2
85 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.935338) with  --  AT1G56675
86 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.935338) with  --  AT4G09146
87 AT3G55680  --  has similar expression pattern (mutual information value=0.938416) with  --  AT1G31100  --  has similar expression pattern (mutual information value=0.869287) with  --  HDG4
88 AT3G55680  --  has similar expression pattern (mutual information value=0.8765) with  --  AT2G20460  --  has similar expression pattern (mutual information value=0.861305) with  --  AT1G53810
89 AT3G55680  --  has similar expression pattern (mutual information value=0.8765) with  --  AT2G20460  --  has similar expression pattern (mutual information value=0.894085) with  --  AT3G26614
90 AT3G55680  --  has similar expression pattern (mutual information value=0.8765) with  --  AT2G20460  --  has similar expression pattern (mutual information value=0.845855) with  --  sks10
91 AT3G55680  --  has similar expression pattern (mutual information value=0.8765) with  --  AT2G20460  --  has similar expression pattern (mutual information value=0.908592) with  --  AT5G54220
92 AT3G55680  --  has similar expression pattern (mutual information value=0.875929) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.820214) with  --  AT1G48095
93 AT3G55680  --  has similar expression pattern (mutual information value=0.875929) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.833179) with  --  AT4G20310
94 AT3G55680  --  has similar expression pattern (mutual information value=0.875929) with  --  AT1G49260  --  has similar expression pattern (mutual information value=0.894945) with  --  AT5G18880
95 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.839595) with  --  AT2G34990
96 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.985118) with  --  AAP8; ATAAP8
97 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.822328) with  --  AT1G09380
98 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.811577) with  --  ATSTP2; STP2
99 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.830896) with  --  AT1G28030
100 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.874355) with  --  AT3G22350
101 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.805079) with  --  AT5G24130
102 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.96839) with  --  AT5G24480
103 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.846708) with  --  CID13
104 AT3G55680  --  has similar expression pattern (mutual information value=0.910931) with  --  AtPP2-B12; PP2-B12  --  has similar expression pattern (mutual information value=0.94945) with  --  AT5G46310
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact