Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATLCB1; EMB2779; FBR11; LCB1
Type: Protein GRN ID: np32598 Name: ATLCB1; EMB2779; FBR11; LCB1
Annotation: ATLCB1, LCB1, EMB2779, FBR11 | long-chain base1 [EC:2.3.1.50]
Gene Locus: AT4G36480
Gene Expression (Affy ATH1 probeset): 246213_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATLCB1; EMB2779; FBR11; LCB1  --  has product (in catalytic reaction)  --  3-Dehydrosphinganine
3 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260
4 ATLCB1; EMB2779; FBR11; LCB1  --  has product (in catalytic reaction)  --  3-Dehydrosphinganine  --  is product (in catalytic reaction) of  --  Palmitoyl-CoA
5 ATLCB1; EMB2779; FBR11; LCB1  --  has product (in catalytic reaction)  --  3-Dehydrosphinganine  --  is product (in catalytic reaction) of  --  AT3G48790
6 ATLCB1; EMB2779; FBR11; LCB1  --  has product (in catalytic reaction)  --  3-Dehydrosphinganine  --  is product (in catalytic reaction) of  --  AT5G19200
7 ATLCB1; EMB2779; FBR11; LCB1  --  has product (in catalytic reaction)  --  3-Dehydrosphinganine  --  is product (in catalytic reaction) of  --  Sphinganine
8 ATLCB1; EMB2779; FBR11; LCB1  --  has product (in catalytic reaction)  --  3-Dehydrosphinganine  --  is product (in catalytic reaction) of  --  AT3G06060
9 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT5G43670
10 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  ATRBL15; RBL15
11 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT4G01150
12 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT5G61340
13 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT3G55600
14 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  ATRAB1A; ATRABD2B; RAB1A
15 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT3G22570
16 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT5G07730
17 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT3G54120
18 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  PRA1.F4
19 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  PRA1.B5
20 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT3G59500
21 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT4G08230
22 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT3G61300
23 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  ERG28
24 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT1G17080
25 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  ANAC001; NAC001
26 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT1G72170
27 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  ATSYP61; OSM1; SYP61
28 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  AT3G09690
29 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  PRA1.B2
30 ATLCB1; EMB2779; FBR11; LCB1  --  interacts with  --  AT3G10260  --  interacts with  --  ATRNS1; RNS1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab