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Location:  Home > Details for node AGD2
Type: Protein GRN ID: np32367 Name: AGD2
Annotation: AGD2 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [EC:2.6.1.83]
Gene Locus: AT4G33680
Gene Expression (Affy ATH1 probeset): 253308_at    
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AGD2  --  has product (in catalytic reaction)  --  2,3,4,5-Tetrahydrodipicolinate
3 AGD2  --  is the target gene of  --  ath-miR5645e
4 AGD2  --  is the target gene of  --  ath-miR5645f
5 AGD2  --  is the target gene of  --  ath-miR5645d
6 AGD2  --  is the target gene of  --  ath-miR5645b
7 AGD2  --  is the target gene of  --  ath-miR5645a
8 AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4
9 AGD2  --  has similar expression pattern (mutual information value=0.800522) with  --  RFO1; WAKL22
10 AGD2  --  has similar expression pattern (mutual information value=0.984541) with  --  WIN1
11 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1
12 AGD2  --  has similar expression pattern (mutual information value=0.81531) with  --  AT3G17710
13 AGD2  --  has similar expression pattern (mutual information value=0.861002) with  --  AT3G02340
14 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1
15 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880
16 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140
17 AGD2  --  has similar expression pattern (mutual information value=1.07995) with  --  AT3G52960
18 AGD2  --  has similar expression pattern (mutual information value=0.895461) with  --  ATHDH; HDH; HISN8
19 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2
20 AGD2  --  has product (in catalytic reaction)  --  2,3,4,5-Tetrahydrodipicolinate  --  has product (in catalytic reaction)  --  (2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate
21 AGD2  --  has product (in catalytic reaction)  --  2,3,4,5-Tetrahydrodipicolinate  --  is product (in catalytic reaction) of  --  LL-2,6-Diaminoheptanedioate
22 AGD2  --  is the target gene of  --  ath-miR5645e  --  inhibit the expression of  --  AT5G30247
23 AGD2  --  is the target gene of  --  ath-miR5645e  --  inhibit the expression of  --  AT5G22600
24 AGD2  --  is the target gene of  --  ath-miR5645e  --  inhibit the expression of  --  AT4G01380
25 AGD2  --  is the target gene of  --  ath-miR5645e  --  inhibit the expression of  --  AT3G22415
26 AGD2  --  is the target gene of  --  ath-miR5645e  --  inhibit the expression of  --  AT1G53450
27 AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4  --  has similar expression pattern (mutual information value=0.865822) with  --  AtTic21; CIA5; PIC1; TIC21
28 AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4  --  has similar expression pattern (mutual information value=0.811998) with  --  OBE1
29 AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4  --  has similar expression pattern (mutual information value=0.892701) with  --  GLB1; PII
30 AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4  --  has similar expression pattern (mutual information value=0.881434) with  --  AT3G62460
31 AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4  --  has similar expression pattern (mutual information value=0.881434) with  --  AT3G62530
32 AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4  --  has similar expression pattern (mutual information value=0.92461) with  --  AT5G17630
33 AGD2  --  has similar expression pattern (mutual information value=0.984541) with  --  WIN1  --  has similar expression pattern (mutual information value=0.979673) with  --  AT3G53560
34 AGD2  --  has similar expression pattern (mutual information value=0.984541) with  --  WIN1  --  has product (in catalytic reaction)  --  N-Acetyl-L-glutamate 5-semialdehyde
35 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.31766) with  --  CJD1
36 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.886309) with  --  CH-CPN60A; CPN60A; SLP
37 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.821922) with  --  AT1G34300
38 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.833214) with  --  AT3G13430
39 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.08175) with  --  DAL; DAL1
40 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.807918) with  --  AT4G11860
41 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.913947) with  --  ARA-7; ARA7; ATRAB-F2B; ATRAB5B; ATRABF2B; RAB-F2B; RABF2B
42 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.97686) with  --  AtTic22-IV; Tic22-IV
43 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.13438) with  --  GSA2
44 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.04931) with  --  AtcpRRF; cpRRF; HFP108; RRF
45 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.04109) with  --  AT5G11450
46 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.821757) with  --  AT-HSFA4C; HSFA4C; RHA1
47 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.15398) with  --  EMB3143
48 AGD2  --  has similar expression pattern (mutual information value=1.08868) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.20618) with  --  AT5G59500
49 AGD2  --  has similar expression pattern (mutual information value=0.861002) with  --  AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4
50 AGD2  --  has similar expression pattern (mutual information value=0.861002) with  --  AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760
51 AGD2  --  has similar expression pattern (mutual information value=0.861002) with  --  AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1
52 AGD2  --  has similar expression pattern (mutual information value=0.861002) with  --  AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  CPuORF4
53 AGD2  --  has similar expression pattern (mutual information value=0.861002) with  --  AT3G02340  --  is the target gene of  --  ath-miR865-3p
54 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.32898) with  --  AT2G37660
55 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.20682) with  --  CLPP6; NCLPP1; NCLPP6
56 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.30818) with  --  PRPL11
57 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.28612) with  --  AT3G08740
58 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.29331) with  --  AT3G13120
59 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=0.813645) with  --  PDLP3
60 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=0.867153) with  --  AT3G48860
61 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.29747) with  --  AT3G52150
62 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=0.883566) with  --  AT3G56160
63 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.21721) with  --  EMB3126
64 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.19785) with  --  CLPP4; NCLPP4
65 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.25981) with  --  AT5G47190
66 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.07374) with  --  AT5G66530
67 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  has similar expression pattern (mutual information value=1.22599) with  --  RPL9
68 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  transport  --  Sugar phosphate
69 AGD2  --  has similar expression pattern (mutual information value=1.02132) with  --  SAMC1; SAMT1  --  transport  --  Aromatic acid
70 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  interacts with  --  ASK17; MEO
71 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  interacts with  --  ASK13; SK13
72 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  interacts with  --  ASK12; SK12
73 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  interacts with  --  ASK3; SK3
74 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  interacts with  --  AtPPa6; PPa6
75 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  interacts with  --  AT5G26790
76 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.822077) with  --  AT2G31130
77 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.823579) with  --  AtBRCC36A; BRCC36A
78 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.823579) with  --  AtBRCC36B; BRCC36B
79 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=1.0439) with  --  ARI5; ATARI5
80 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.897349) with  --  AT1G68140
81 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.828506) with  --  AT1G70590
82 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.900371) with  --  AT3G24740
83 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.847399) with  --  AT4G13160
84 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.852473) with  --  AT5G11680
85 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.819837) with  --  EMB3136
86 AGD2  --  has similar expression pattern (mutual information value=0.87149) with  --  AT3G48880  --  has similar expression pattern (mutual information value=0.891445) with  --  SBP1
87 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.03461) with  --  CPN60B; LEN1
88 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=0.812718) with  --  AT1G08800
89 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=0.952277) with  --  ATHY2; GUN3; HY2
90 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=0.944175) with  --  AT3G09250
91 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=0.860433) with  --  ATNHD1; NHD1
92 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.00711) with  --  AT3G28460
93 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.16739) with  --  AT3G12930
94 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=0.872597) with  --  AT3G27180
95 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.1262) with  --  AT4G20960
96 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=0.973014) with  --  AT4G23940
97 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=0.822242) with  --  ATSUFE; CPSUFE; EMB1374; SUFE1
98 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.00397) with  --  AT3G63170
99 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.18483) with  --  ATDEF2; DEF2; PDF1B
100 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.16886) with  --  FSD3
101 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.06128) with  --  AT5G46580
102 AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140  --  has similar expression pattern (mutual information value=1.11138) with  --  SVR7
103 AGD2  --  has similar expression pattern (mutual information value=1.07995) with  --  AT3G52960  --  has similar expression pattern (mutual information value=0.813312) with  --  AT3G25470
104 AGD2  --  has similar expression pattern (mutual information value=1.07995) with  --  AT3G52960  --  has similar expression pattern (mutual information value=0.801419) with  --  ATSYP81; ATUFE1; SYP81; UFE1
105 AGD2  --  has similar expression pattern (mutual information value=1.07995) with  --  AT3G52960  --  has similar expression pattern (mutual information value=0.946237) with  --  PMSR4
106 AGD2  --  has similar expression pattern (mutual information value=1.07995) with  --  AT3G52960  --  interacts with  --  ARD4; ATARD4
107 AGD2  --  has similar expression pattern (mutual information value=0.895461) with  --  ATHDH; HDH; HISN8  --  has similar expression pattern (mutual information value=1.1205) with  --  AT2G19940
108 AGD2  --  has similar expression pattern (mutual information value=0.895461) with  --  ATHDH; HDH; HISN8  --  has similar expression pattern (mutual information value=0.926738) with  --  AT2G25830
109 AGD2  --  has similar expression pattern (mutual information value=0.895461) with  --  ATHDH; HDH; HISN8  --  has similar expression pattern (mutual information value=1.05611) with  --  AK-HSDH; AK-HSDH I
110 AGD2  --  has similar expression pattern (mutual information value=0.895461) with  --  ATHDH; HDH; HISN8  --  has similar expression pattern (mutual information value=0.875554) with  --  AT1G14810
111 AGD2  --  has similar expression pattern (mutual information value=0.895461) with  --  ATHDH; HDH; HISN8  --  has similar expression pattern (mutual information value=0.984657) with  --  ATBCAT-3; BCAT3
112 AGD2  --  has similar expression pattern (mutual information value=0.895461) with  --  ATHDH; HDH; HISN8  --  has product (in catalytic reaction)  --  L-Histidine
113 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2  --  interacts with  --  AT5G57170
114 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2  --  has similar expression pattern (mutual information value=0.865324) with  --  PDE328; SVR1
115 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2  --  has similar expression pattern (mutual information value=1.11071) with  --  AT1G14030
116 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2  --  has similar expression pattern (mutual information value=1.2711) with  --  AT1G12800
117 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2  --  has similar expression pattern (mutual information value=1.01777) with  --  emb2768
118 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2  --  has similar expression pattern (mutual information value=1.35666) with  --  APG1; E37; IEP37; VTE3
119 AGD2  --  has similar expression pattern (mutual information value=1.04165) with  --  PHR2  --  has similar expression pattern (mutual information value=1.03887) with  --  AT5G01590
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