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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G02340
Type: Protein GRN ID: np27150 Name:
Annotation: RING/U-box superfamily protein
Gene Locus: AT3G02340
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 256326_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G02340  --  is the target gene of  --  ath-miR865-3p
3 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4
4 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1
5 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760
6 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2
7 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1
8 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  CPuORF4
9 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  OBE2
10 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  RLM3
11 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  GTE6
12 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  ATDFC; DFC; FPGS2
13 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT3G09050
14 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  ATEXP4; ATEXPA4; ATHEXP ALPHA 1.6; EXPA4
15 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  GTE01; GTE1; IMB1
16 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT2G07750
17 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT2G05025
18 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT1G63250
19 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  UGT74E2
20 AT3G02340  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  ATRING1B; RING1B
21 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.894578) with  --  AT2G24090
22 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.828648) with  --  CRF7
23 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.889343) with  --  AT2G22230
24 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.800759) with  --  AT1G34300
25 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.898984) with  --  AT1G70590
26 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.866988) with  --  AT3G19910
27 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.813304) with  --  AT3G12140
28 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.874162) with  --  NF-YC11
29 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.960776) with  --  CH-42; CH42; CHL11; CHLI-1; CHLI1
30 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.930346) with  --  PSB28
31 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.944911) with  --  AT3G48880
32 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.97693) with  --  GSA2
33 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.848542) with  --  NAGK
34 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.873971) with  --  AT5G05100
35 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.85118) with  --  DiT1
36 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.884312) with  --  RPL27
37 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.835302) with  --  AT5G63260
38 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.843064) with  --  AT5G63640
39 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.891766) with  --  EMB3136
40 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.882674) with  --  SBP1
41 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  has similar expression pattern (mutual information value=0.842026) with  --  ATRCY1; RCY1
42 AT3G02340  --  has similar expression pattern (mutual information value=0.819286) with  --  WRKY4  --  is the target gene of  --  ath-miR5640
43 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.31766) with  --  CJD1
44 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.886309) with  --  CH-CPN60A; CPN60A; SLP
45 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.14224) with  --  WIN1
46 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.833214) with  --  AT3G13430
47 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.08175) with  --  DAL; DAL1
48 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.807918) with  --  AT4G11860
49 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.913947) with  --  ARA-7; ARA7; ATRAB-F2B; ATRAB5B; ATRABF2B; RAB-F2B; RABF2B
50 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.97686) with  --  AtTic22-IV; Tic22-IV
51 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.13903) with  --  SAMC1; SAMT1
52 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.4263) with  --  AT3G52960
53 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.04931) with  --  AtcpRRF; cpRRF; HFP108; RRF
54 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.04109) with  --  AT5G11450
55 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.821757) with  --  AT-HSFA4C; HSFA4C; RHA1
56 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.15398) with  --  EMB3143
57 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.20618) with  --  AT5G59500
58 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=0.842678) with  --  ATHDH; HDH; HISN8
59 AT3G02340  --  has similar expression pattern (mutual information value=0.930117) with  --  ATYLMG1-1; emb1990; YLMG1-1  --  has similar expression pattern (mutual information value=1.09451) with  --  PHR2
60 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760  --  has similar expression pattern (mutual information value=0.887781) with  --  AT2G20270
61 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760  --  has similar expression pattern (mutual information value=0.829049) with  --  AT2G42770
62 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760  --  has similar expression pattern (mutual information value=0.952609) with  --  AtTic21; CIA5; PIC1; TIC21
63 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760  --  has similar expression pattern (mutual information value=0.904744) with  --  ALDH7B4
64 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760  --  has similar expression pattern (mutual information value=0.857725) with  --  AT1G26580
65 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760  --  has similar expression pattern (mutual information value=1.06555) with  --  ATCPN21; CHCPN10; CPN10; CPN20; CPN21
66 AT3G02340  --  has similar expression pattern (mutual information value=0.816373) with  --  AT1G29760  --  has similar expression pattern (mutual information value=0.85008) with  --  ATATP-PRT1; ATP-PRT1; HISN1A
67 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  has similar expression pattern (mutual information value=0.815621) with  --  CXIP4
68 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  has similar expression pattern (mutual information value=0.800522) with  --  RFO1; WAKL22
69 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  has similar expression pattern (mutual information value=0.81531) with  --  AT3G17710
70 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  has similar expression pattern (mutual information value=1.10993) with  --  AT3G51140
71 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  has product (in catalytic reaction)  --  2,3,4,5-Tetrahydrodipicolinate
72 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  is the target gene of  --  ath-miR5645e
73 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  is the target gene of  --  ath-miR5645f
74 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  is the target gene of  --  ath-miR5645d
75 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  is the target gene of  --  ath-miR5645b
76 AT3G02340  --  has similar expression pattern (mutual information value=0.861002) with  --  AGD2  --  is the target gene of  --  ath-miR5645a
77 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  AtbZIP44; bZIP44
78 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  AtbZIP63; BZO2H3
79 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  ATBZIP25; BZIP25; BZO2H4
80 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  ATB2; AtbZIP11; BZIP11; GBF6
81 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  MED10A
82 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  ATBZIP4; bZIP4
83 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  AtbZIP58; bZIP58
84 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  ATBZIP42; bZIP42
85 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  ATBZIP10; BZO2H1
86 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  interacts with  --  ATBZIP9; BZIP9; BZO2H2
87 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  regulates the expression of   --  ASN1; AT-ASN1; DIN6
88 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  has similar expression pattern (mutual information value=0.976847) with  --  ATHSPRO2; HSPRO2
89 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  has similar expression pattern (mutual information value=0.870076) with  --  AT1G10150
90 AT3G02340  --  has similar expression pattern (mutual information value=0.872175) with  --  AtbZIP1; bZIP1  --  has similar expression pattern (mutual information value=0.932139) with  --  ATTPS8; ATTPSC; TPS8
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