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Location:  Home > Details for node AT3G53410
Type: Protein GRN ID: np27600 Name:
Annotation: RING/U-box superfamily protein [TCDB:3.A.18.1]
Gene Locus: AT3G53410
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 251959_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G53410  --  interacts with  --  ATGDU3; GDU3; LSB1
3 AT3G53410  --  interacts with  --  ATGDU2; GDU2
4 AT3G53410  --  interacts with  --  AT5G65660
5 AT3G53410  --  has similar expression pattern (mutual information value=0.81305) with  --  AT5G05230
6 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5
7 AT3G53410  --  has similar expression pattern (mutual information value=0.814959) with  --  ATBPC6; BBR/BPC6; BPC6
8 AT3G53410  --  interacts with  --  ATGDU3; GDU3; LSB1  --  interacts with  --  AT5G03200
9 AT3G53410  --  interacts with  --  ATGDU3; GDU3; LSB1  --  interacts with  --  AT3G09770
10 AT3G53410  --  interacts with  --  ATGDU3; GDU3; LSB1  --  interacts with  --  CYP71B22
11 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AT5G19080
12 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATCAT6; CAT6
13 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATPTR2; ATPTR2-B; NTR1; PTR2; PTR2-B
14 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AT2G41190
15 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  GF14 IOTA; GRF12
16 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATHH2; PIP1;2; PIP1B; TMP-A
17 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ERS2
18 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATGLR1.3; GLR1.3
19 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  LAC11
20 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  TMT2
21 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATSTP1; STP1
22 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATIREG1; FPN1; IREG1
23 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ACA3; ATECA1; ECA1
24 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATGSTF2; ATPM24; ATPM24.1; GST2; GSTF2
25 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AT5G65990
26 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AAP4
27 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATMLO11; MLO11
28 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AT3G05400
29 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AT4G22790
30 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATCBL1
31 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATCNGC20; CNBT1; CNGC20
32 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AMT1;4
33 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AT5G33280
34 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  PHT4;3
35 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATVAMP711; VAMP711
36 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AKIN11; ATKIN11; KIN11; SNRK1.2
37 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ANT1
38 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATMLO13; MLO13
39 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ATFRD3; FRD3; MAN1
40 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  Phytochrome B (PhyB)
41 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ABCG12; AtABCG12; ATWBC12; CER5; D3; WBC12
42 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ERD6
43 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  KEU
44 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  AT4G18205
45 AT3G53410  --  interacts with  --  ATGDU2; GDU2  --  interacts with  --  ACAM-2; CAM5
46 AT3G53410  --  has similar expression pattern (mutual information value=0.81305) with  --  AT5G05230  --  has similar expression pattern (mutual information value=0.807222) with  --  AT3G11100
47 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  regulates the expression of   --  PR1
48 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  ROXY2
49 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  ATNPR3; NPR3
50 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  NPR1 /NIM1
51 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  GRX480; roxy19
52 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  RCN1 ATB BETA BETA
53 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  BOP2
54 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  AT4G32190
55 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  TPR2
56 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  interacts with  --  ATNPR4; NPR4
57 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  has similar expression pattern (mutual information value=0.827228) with  --  PUX2
58 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  has similar expression pattern (mutual information value=0.818108) with  --  AT1G61620
59 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  has similar expression pattern (mutual information value=0.862896) with  --  MGT4; MRS2-3
60 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  has similar expression pattern (mutual information value=0.931725) with  --  AT5G04910
61 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  has similar expression pattern (mutual information value=0.877486) with  --  FIP2
62 AT3G53410  --  has similar expression pattern (mutual information value=0.828805) with  --  OBF5  --  has similar expression pattern (mutual information value=0.841989) with  --  AT4G16440
63 AT3G53410  --  has similar expression pattern (mutual information value=0.814959) with  --  ATBPC6; BBR/BPC6; BPC6  --  interacts with  --  ATBPC4; BBR; BPC4
64 AT3G53410  --  has similar expression pattern (mutual information value=0.814959) with  --  ATBPC6; BBR/BPC6; BPC6  --  interacts with  --  ATBPC1; BBR; BPC1
65 AT3G53410  --  has similar expression pattern (mutual information value=0.814959) with  --  ATBPC6; BBR/BPC6; BPC6  --  has similar expression pattern (mutual information value=0.802672) with  --  SUE3; VIP1
66 AT3G53410  --  has similar expression pattern (mutual information value=0.814959) with  --  ATBPC6; BBR/BPC6; BPC6  --  has similar expression pattern (mutual information value=0.861371) with  --  AT3G09850
67 AT3G53410  --  has similar expression pattern (mutual information value=0.814959) with  --  ATBPC6; BBR/BPC6; BPC6  --  has similar expression pattern (mutual information value=0.833778) with  --  AT3G56720
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