Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G27150
Type: Protein GRN ID: np29620 Name:
Annotation: Galactose oxidase/kelch repeat superfamily protein
Gene Locus: AT3G27150
Gene Expression (Affy ATH1 probeset): 256750_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G27150  --  is the target gene of  --  ath-miR2111b-5p
3 AT3G27150  --  is the target gene of  --  ath-miR2111a-5p
4 AT3G27150  --  has similar expression pattern (mutual information value=0.800588) with  --  SHW1
5 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240
6 AT3G27150  --  is the target gene of  --  ath-miR2111b-5p  --  inhibit the expression of  --  AT5G52010
7 AT3G27150  --  is the target gene of  --  ath-miR2111b-5p  --  inhibit the expression of  --  AT5G45060
8 AT3G27150  --  is the target gene of  --  ath-miR2111b-5p  --  inhibit the expression of  --  ACO1
9 AT3G27150  --  is the target gene of  --  ath-miR2111b-5p  --  inhibit the expression of  --  AT1G25550
10 AT3G27150  --  is the target gene of  --  ath-miR2111b-5p  --  inhibit the expression of  --  AT1G07010
11 AT3G27150  --  has similar expression pattern (mutual information value=0.800588) with  --  SHW1  --  has similar expression pattern (mutual information value=1.0166) with  --  AT1G68660
12 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.1423) with  --  AT2G25980
13 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.03228) with  --  AT1G52050
14 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.0868) with  --  ATCNGC14; CNGC14
15 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=0.914024) with  --  RGF3
16 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.09467) with  --  AT1G33750
17 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.09445) with  --  ATBS1
18 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.02478) with  --  MEL4; NPY4
19 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.00294) with  --  LBD13
20 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.13349) with  --  AT1G31950
21 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=0.823202) with  --  AT4G01240
22 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.04099) with  --  AT5G10130
23 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=0.986127) with  --  AT5G35940
24 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=0.984984) with  --  ATS; KAN4
25 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.05212) with  --  AT5G48940
26 AT3G27150  --  has similar expression pattern (mutual information value=0.817851) with  --  AT3G15240  --  has similar expression pattern (mutual information value=1.12059) with  --  AHK5; CKI2; HK5
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact