Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AGL4; SEP2
Type: Protein GRN ID: np29080 Name: AGL4; SEP2
Annotation: SEP2, AGL4 | K-box region and MADS-box transcription factor family protein
Gene Locus: AT3G02310
Transcription factor /
transcriptional regulator:		 transcription factor family MADS-MIKC
Gene Expression (Affy ATH1 probeset): 259124_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AGL4; SEP2  --  interacts with  --  AGL16
3 AGL4; SEP2  --  interacts with  --  AGL21
4 AGL4; SEP2  --  interacts with  --  SOC1
5 AGL4; SEP2  --  interacts with  --  ABS; AGL32; TT16
6 AGL4; SEP2  --  interacts with  --  AG
7 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  FLC
8 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL22; SVP
9 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL63; GOA
10 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL44; ANR1
11 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL17
12 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL12; XAL1
13 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL11; STK
14 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  ap1
15 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL6
16 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL5; SHP2
17 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL1; SHP1
18 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL53
19 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL42
20 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL24
21 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL15
22 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL14
23 AGL4; SEP2  --  interacts with  --  AGL16  --  interacts with  --  AGL2; SEP1
24 AGL4; SEP2  --  interacts with  --  AGL16  --  is the target gene of  --  ath-miR824
25 AGL4; SEP2  --  interacts with  --  AGL21  --  interacts with  --  AGL19; GL19
26 AGL4; SEP2  --  interacts with  --  AGL21  --  interacts with  --  AGL13
27 AGL4; SEP2  --  interacts with  --  AGL21  --  interacts with  --  ful
28 AGL4; SEP2  --  interacts with  --  AGL21  --  has similar expression pattern (mutual information value=0.932882) with  --  AT1G22440
29 AGL4; SEP2  --  interacts with  --  SOC1  --  regulates the expression of   --  CBFS
30 AGL4; SEP2  --  interacts with  --  SOC1  --  regulates the expression of   --  LFY
31 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  RID3
32 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  AT5G47590
33 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  AGL71
34 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  CAL
35 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  AGL3; SEP4
36 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  AT2G24550
37 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  ARR14
38 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  TPR3
39 AGL4; SEP2  --  interacts with  --  SOC1  --  interacts with  --  TPR2
40 AGL4; SEP2  --  interacts with  --  ABS; AGL32; TT16  --  interacts with  --  AGL97
41 AGL4; SEP2  --  interacts with  --  ABS; AGL32; TT16  --  interacts with  --  AGL92
42 AGL4; SEP2  --  interacts with  --  ABS; AGL32; TT16  --  interacts with  --  AT1G48150
43 AGL4; SEP2  --  interacts with  --  AG  --  regulates the expression of   --  ATH1
44 AGL4; SEP2  --  interacts with  --  AG  --  regulates the expression of   --  AP3; ATAP3
45 AGL4; SEP2  --  interacts with  --  AG  --  regulates the expression of   --  AT3G11000
46 AGL4; SEP2  --  interacts with  --  AG  --  regulates the expression of   --  CRC
47 AGL4; SEP2  --  interacts with  --  AG  --  regulates the expression of   --  AT1G47610
48 AGL4; SEP2  --  interacts with  --  AG  --  regulates the expression of   --  ATGA3OX1
49 AGL4; SEP2  --  interacts with  --  AG  --  regulates the expression of   --  JGL; NUB
50 AGL4; SEP2  --  interacts with  --  AG  --  is regulated by  --  BLH9; BLR; HB-6; LSN; PNY; RPL; VAN
51 AGL4; SEP2  --  interacts with  --  AG  --  is regulated by  --  PGA6; WUS; WUS1
52 AGL4; SEP2  --  interacts with  --  AG  --  interacts with  --  PI
53 AGL4; SEP2  --  interacts with  --  AG  --  interacts with  --  FLOR1; FLR1
54 AGL4; SEP2  --  interacts with  --  AG  --  interacts with  --  AGL39
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact