Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G19830
Type: Protein GRN ID: np11664 Name:
Annotation: SAUR-like auxin-responsive protein family
Gene Locus: AT1G19830
Gene Expression (Affy ATH1 probeset): 261137_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G19830  --  interacts with  --  RTL1
3 AT1G19830  --  interacts with  --  ATFIP37; FIP37
4 AT1G19830  --  interacts with  --  RTL1  --  interacts with  --  AT2G22230
5 AT1G19830  --  interacts with  --  RTL1  --  interacts with  --  CP12; CP12-1
6 AT1G19830  --  interacts with  --  RTL1  --  interacts with  --  AT5G63350
7 AT1G19830  --  interacts with  --  RTL1  --  interacts with  --  AT4G32440
8 AT1G19830  --  interacts with  --  RTL1  --  interacts with  --  AT1G49140
9 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  KIWI
10 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  AT5G65683
11 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  AT1G54770
12 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  BRX
13 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  AT3G08780
14 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  ATBPM3; BPM3
15 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  AT2G30120
16 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  interacts with  --  ATFKBP12; FKBP12
17 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.882266) with  --  AT2G02570
18 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.921488) with  --  AT2G16860
19 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.898424) with  --  ATIPT2
20 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.890952) with  --  SMP1
21 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.881332) with  --  MBD10
22 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.955617) with  --  AT1G15200
23 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.895295) with  --  AT1G32630
24 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.882162) with  --  NF-YC10
25 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.864016) with  --  AT3G09360
26 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.814375) with  --  AT3G08880
27 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.878592) with  --  AT3G19650
28 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.895898) with  --  AT4G39160
29 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.976506) with  --  AT3G48120
30 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.817238) with  --  AT5G06780
31 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.800932) with  --  AT5G11760
32 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.826071) with  --  AT5G50020
33 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.826366) with  --  NRPB6A; NRPD6A; NRPE6A
34 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.904032) with  --  AT5G53800
35 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.855311) with  --  ELF9
36 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.925366) with  --  AT1G31870
37 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.900879) with  --  FAR1
38 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  has similar expression pattern (mutual information value=0.955064) with  --  SMU2
39 AT1G19830  --  interacts with  --  ATFIP37; FIP37  --  is the target gene of  --  ath-miR4221
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab