Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G09050
Type: Protein GRN ID: np25603 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 120 Blast hits to 120 proteins in 47 species: Archae - 4; Bacteria - 10; Metazoa - 33; Fungi - 2; Plants - 44; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Gene Locus: AT3G09050
Gene Expression (Affy ATH1 probeset): 259207_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G09050  --  is the target gene of  --  ath-miR865-3p
3 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870
4 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14
5 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  OBE2
6 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  RLM3
7 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  GTE6
8 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  ATDFC; DFC; FPGS2
9 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT3G02340
10 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  ATEXP4; ATEXPA4; ATHEXP ALPHA 1.6; EXPA4
11 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  GTE01; GTE1; IMB1
12 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT2G07750
13 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT2G05025
14 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  AT1G63250
15 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  UGT74E2
16 AT3G09050  --  is the target gene of  --  ath-miR865-3p  --  inhibit the expression of  --  ATRING1B; RING1B
17 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.00599) with  --  AT1G54500
18 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.19825) with  --  AT1G68590
19 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.01605) with  --  APG2; PGA2; TATC; UNE3
20 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.11959) with  --  AT3G19800
21 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=0.991668) with  --  AT3G12685
22 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.0865) with  --  AT3G22210
23 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=0.852653) with  --  PHS1
24 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.09107) with  --  EMB3129
25 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.01373) with  --  AT3G51510
26 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=0.851269) with  --  AT5G09820
27 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.03354) with  --  ARRPS1; RPS1
28 AT3G09050  --  has similar expression pattern (mutual information value=0.866335) with  --  AT2G01870  --  has similar expression pattern (mutual information value=1.0773) with  --  AT4G16410
29 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.27279) with  --  CRR3
30 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.35447) with  --  CCB4
31 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G64150
32 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.15474) with  --  AT1G29700
33 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.05109) with  --  CYP706A6
34 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.05109) with  --  CYP706A5
35 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.01085) with  --  AT4G13200
36 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=0.908355) with  --  ATSS4; SS4; SSIV
37 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.21753) with  --  ATRP1; RP1
38 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.04473) with  --  ATCBL10; CBL10; SCABP8
39 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.25344) with  --  FKBP16-2
40 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.24109) with  --  HCEF1
41 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.23265) with  --  AT3G56650
42 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=0.87483) with  --  ABCB29; ATATH12; ATH12
43 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.33881) with  --  AT5G07020
44 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.21821) with  --  AT5G08650
45 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=0.980437) with  --  PSRP6
46 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=0.96438) with  --  G6PD1
47 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.34187) with  --  AT5G38520
48 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.19189) with  --  AT5G42310
49 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.34401) with  --  AT5G58260
50 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.18809) with  --  AT5G27560
51 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.04634) with  --  MEX1; RCP1
52 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.25643) with  --  LHCA5
53 AT3G09050  --  has similar expression pattern (mutual information value=0.948005) with  --  ATHDA14; hda14  --  has similar expression pattern (mutual information value=1.25126) with  --  ATLDA; ATPU1; LDA; PU1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact