Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G02400
Type: Protein GRN ID: np27116 Name:
Annotation: SMAD/FHA domain-containing protein [TCDB:9.A.5.1]
Gene Locus: AT3G02400
Transcription factor /
transcriptional regulator:		 transcription factor interactor and regulator family FHA-SMAD
Gene Expression (Affy ATH1 probeset): 258476_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650
3 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=1.11367) with  --  AT2G16860
4 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=1.01922) with  --  ATIPT2
5 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.931575) with  --  AT2G40650
6 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.801271) with  --  ELF8; VIP6
7 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.858356) with  --  AT1G09660
8 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.809416) with  --  AT1G77170
9 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.809416) with  --  AT1G77150
10 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.928883) with  --  AT1G79200
11 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.904166) with  --  AT1G15200
12 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=1.12696) with  --  AT1G80790
13 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.901681) with  --  AT1G15910
14 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.901681) with  --  AT4G00380
15 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.917181) with  --  ATPRP40A; PRP40A
16 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.992778) with  --  NF-YC10
17 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=1.11918) with  --  CRWN3; LINC3
18 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.958397) with  --  ATPC2
19 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.909915) with  --  CDC48C; emb1354
20 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.940396) with  --  AT3G09360
21 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.905843) with  --  AT2G34040
22 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.852354) with  --  AT4G08460
23 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.818136) with  --  AT4G12340
24 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.953012) with  --  AT4G39160
25 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.970791) with  --  AT3G51270
26 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.878592) with  --  ATFIP37; FIP37
27 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.81049) with  --  AT5G14820
28 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.81049) with  --  AT3G62540
29 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.81049) with  --  AT3G62470
30 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.91572) with  --  AT5G11760
31 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.923128) with  --  AT5G14440
32 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.958149) with  --  AT5G50020
33 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.828931) with  --  MEF1
34 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=1.24632) with  --  AT5G53800
35 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=1.09545) with  --  AT1G48900
36 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=0.842522) with  --  AT5G16950
37 AT3G02400  --  has similar expression pattern (mutual information value=0.824699) with  --  AT3G19650  --  has similar expression pattern (mutual information value=1.03325) with  --  SMU2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact