Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PAPS2
Type: Protein GRN ID: np21038 Name: PAPS2
Annotation: PAPS2 | poly(A) polymerase 2 [EC:2.7.7.19]
Gene Locus: AT2G25850
Gene Expression (Affy ATH1 probeset): 266659_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PAPS2  --  has product (in catalytic reaction)  --  RNA
3 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5
4 PAPS2  --  interacts with  --  ATCPSF30; CPSF30
5 PAPS2  --  interacts with  --  ATCPSF100; CPSF100; EMB1265; ESP5
6 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  has product (in catalytic reaction)  --  NDP
7 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  RDR2; SMD1
8 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  Nucleoside triphosphate
9 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  RDR6; SDE1; SGS2
10 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  AT2G19930
11 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  AT2G19920
12 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  ATRDRP1; RDR1
13 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  AT5G14580
14 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  PDE326; PNP; RIF10
15 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  NRPC1
16 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  NRPC2
17 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  AT5G15700
18 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  NRPA1
19 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  DMS2; DRD2; NRPD2; NRPD2A; NRPE2
20 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  NRPD2B
21 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  ATNRPD1B; DMS5; DRD3; NRPD1B; NRPE1
22 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  PDE319; SCA3
23 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  MGP3
24 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  NRPD1; NRPD1A; POL IVA; SDE4; SMD2
25 PAPS2  --  has product (in catalytic reaction)  --  RNA  --  is product (in catalytic reaction) of  --  NRPA2
26 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  AT5G65260
27 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  ATPABN1; PABN1
28 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  ATCFIM-25; CFIM-25
29 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  AT3G66652
30 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  PAPS3
31 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  CSTF64
32 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  AT4G25550
33 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  nPAP; PAP(IV)
34 PAPS2  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5  --  interacts with  --  ATCSTF77; CSTF77
35 PAPS2  --  interacts with  --  ATCPSF30; CPSF30  --  interacts with  --  PCFS4
36 PAPS2  --  interacts with  --  ATCPSF30; CPSF30  --  interacts with  --  AT1G66500
37 PAPS2  --  interacts with  --  ATCPSF30; CPSF30  --  interacts with  --  AT5G60940
38 PAPS2  --  interacts with  --  ATCPSF30; CPSF30  --  interacts with  --  CLPS3
39 PAPS2  --  interacts with  --  ATCPSF30; CPSF30  --  interacts with  --  ATCPSF160; CPSF160
40 PAPS2  --  interacts with  --  ATCPSF30; CPSF30  --  interacts with  --  FIP1
41 PAPS2  --  interacts with  --  ATCPSF30; CPSF30  --  is the target gene of  --  ath-miR869.2
42 PAPS2  --  interacts with  --  ATCPSF100; CPSF100; EMB1265; ESP5  --  interacts with  --  FY
43 PAPS2  --  interacts with  --  ATCPSF100; CPSF100; EMB1265; ESP5  --  interacts with  --  ATCPSF73-II; CPSF73-II; EDA26
44 PAPS2  --  interacts with  --  ATCPSF100; CPSF100; EMB1265; ESP5  --  interacts with  --  CPSF73-I
45 PAPS2  --  interacts with  --  ATCPSF100; CPSF100; EMB1265; ESP5  --  interacts with  --  AT4G10500
46 PAPS2  --  interacts with  --  ATCPSF100; CPSF100; EMB1265; ESP5  --  has similar expression pattern (mutual information value=0.843781) with  --  AT2G18330
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab