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Location:  Home > Details for node AT2G19540
Type: Protein GRN ID: np19464 Name:
Annotation: Transducin family protein / WD-40 repeat family protein [TCDB:9.A.48.1]
Gene Locus: AT2G19540
Transcription factor /
transcriptional regulator:		 transcription factor family WD40-like
Gene Expression (Affy ATH1 probeset): 265947_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G19540  --  interacts with  --  DDB1A
3 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2
4 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT5G12920
5 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  DCAF1
6 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT2G34260
7 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT5G41560
8 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT4G15730
9 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT4G22250
10 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  FVE
11 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  DWA3
12 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  ATMSI1; MEE70; MSI1
13 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  DWA2
14 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  SPA4
15 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  SPA3
16 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  SPA2
17 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  COP1
18 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  SPA1
19 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  PRL1
20 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  FY
21 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT3G45620
22 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT4G28450
23 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT1G65030
24 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  TIF3I1; TRIP-1
25 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  VIP3
26 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  RAE1
27 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  MSI3; NFC3
28 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AtTHO6; DWA1; THO6
29 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  DDB2
30 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  ATDET1; DET1; FUS2
31 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  ATCUL4; CUL4
32 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  CIN4; COP10; EMB144; FUS9
33 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT4G03020
34 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT3G20620
35 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  AT1G19750
36 AT2G19540  --  interacts with  --  DDB1A  --  interacts with  --  ATCSA-1
37 AT2G19540  --  interacts with  --  DDB1A  --  is a member of  --  CDD complex?
38 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.917581) with  --  AT1G45332
39 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.917581) with  --  AT2G45030
40 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=1.02567) with  --  AT2G40700
41 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.815048) with  --  EMB2217
42 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.953807) with  --  AT1G18850
43 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.864729) with  --  EMB1860; TIM50
44 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.830049) with  --  TRZ3
45 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=1.09509) with  --  AT3G07750
46 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.818412) with  --  APUM24; PUM24
47 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.807153) with  --  AT3G15590
48 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.809328) with  --  ATPRMT3; PRMT3
49 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.860117) with  --  RBL
50 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.880327) with  --  ATRH25; STRS2
51 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.812908) with  --  AT5G39840
52 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.882993) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
53 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.883151) with  --  AT5G16930
54 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.890004) with  --  AT1G30240
55 AT2G19540  --  has similar expression pattern (mutual information value=0.863351) with  --  NRPA2  --  has product (in catalytic reaction)  --  RNA
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